RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FDXRP22570 491 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 ZFP36P26651 326 aaKnown RBP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 ANXA11P50995 505 aaKnown RBP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 RPS7P62081 194 aaKnown RBP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 BLOC1S1P78537 153 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 GUCY1B3Q02153 619 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 SAFBQ15424 915 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 CYP2A13Q16696 494 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 SLC44A4Q53GD3 710 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 COBLL1Q53SF7 1204 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 SPATA31A3Q5VYP0 1347 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 LMBRD2Q68DH5 695 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 IGFL4Q6B9Z1 124 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 PPP1R32Q7Z5V6 425 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 Q8NA96 180 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 PJA1Q8NG27 643 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 FBXO41Q8TF61 875 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 RNF31Q96EP0 1072 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 P2RX7Q99572 595 aaKnown RBP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 HEPHQ9BQS7 1158 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 ALOXE3Q9BYJ1 711 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 BTBD1Q9H0C5 482 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 ARNT2Q9HBZ2 717 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 KIAA1586Q9HCI6 787 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 SLC2A4RGQ9NR83 387 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 CTTNBP2NLQ9P2B4 639 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 HS3ST4Q9Y661 456 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 CCDC78A2IDD5 438 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 M0QYG6 137 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 MYO1CO00159 1063 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 BTN3A1O00481 513 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 NARSO43776 548 aaKnown RBP4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 DNAJB5O75953 348 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 UNC5CO95185 931 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 ABHD16AO95870 558 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 ERBB2P04626 1255 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 GRPP07492 148 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 XRCC6P12956 609 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 VIPR2P41587 438 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 VAV2P52735 878 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 TAP1Q03518 808 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 FPGSQ05932 587 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 DYRK1AQ13627 763 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 RAB32Q13637 225 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 HLXQ14774 488 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 PTPAQ15257 358 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 CNGA2Q16280 664 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 FNDC7Q5VTL7 733 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 KCNV1Q6PIU1 500 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 KSR2Q6VAB6 950 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 TMPRSS9Q7Z410 1059 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 MRGPREQ86SM8 312 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 CELF5Q8N6W0 485 aaKnown RBP4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 PCSK9Q8NBP7 692 aaKnown RBP4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 ADAM2Q99965 735 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 SPATA5L1Q9BVQ7 753 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 ZNF287Q9HBT7 754 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 ETAA1Q9NY74 926 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 HESX1Q9UBX0 185 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 OGDHLQ9ULD0 1010 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 AGAP1Q9UPQ3 857 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 MAP3K2Q9Y2U5 619 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 TMX2Q9Y320 296 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 RAD54BQ9Y620 910 aa4.07□□□□□ -1.76
HMGB1P41-201ENST00000520234 RB1CC1Q8TDY2 1594 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 USP19O94966 1318 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 TRGV11A0A075B6L2 103 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 CENPVL1A0A0U1RR11 272 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 TOR1BO14657 336 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 TBX3O15119 743 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 PLIN1O60240 522 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 SUN1O94901 812 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 KIF20AO95235 890 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 SPDEFO95238 335 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 CENPBP07199 599 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 ATXN1LP0C7T5 689 aaKnown RBP4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 BRAFP15056 766 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 SLC11A2P49281 568 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 SUMO3P55854 103 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 WNT3P56703 355 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 FMO1Q01740 532 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 SATB1Q01826 763 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 CCDC142Q17RM4 750 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 LONRF3Q496Y0 759 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 ABHD17BQ5VST6 288 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 MICALCLQ6ZW33 695 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 COL23A1Q86Y22 540 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 PSD4Q8NDX1 1056 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 FAM46DQ8NEK8 389 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 PROKR1Q8TCW9 393 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 PHKBQ93100 1093 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 NACC2Q96BF6 587 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 NMD3Q96D46 503 aaKnown RBP4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 LRIG1Q96JA1 1093 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 ZNF518BQ9C0D4 1074 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 MMRN2Q9H8L6 949 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 TBCCD1Q9NVR7 557 aa4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 VSX1Q9NZR4 365 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 RGS17Q9UGC6 210 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms