RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 PLA2G4AP47712 749 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 CBX1P83916 185 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 CAP1Q01518 475 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 PAK2Q13177 524 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 GPS2Q13227 327 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 AADACL2Q6P093 401 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 EMBQ6PCB8 327 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 DCUN1D2Q6PH85 259 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 RPAINQ86UA6 219 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 C3orf20Q8ND61 904 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 MTUS1Q9ULD2 1270 aa28.56■■■□□ 2.16
COL13A1-212ENST00000520133 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.56■■■□□ 2.16
COL13A1-212ENST00000520133 TCRBV5S1A1TA0A578 114 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 TMEM191CA6NGB0 347 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 PSTPIP1O43586 416 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 STILQ15468 1287 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 RHOT1Q8IXI2 618 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 KLK14Q9P0G3 267 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 WDR35Q9P2L0 1181 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 AMACRQ9UHK6 382 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 MICAL2O94851 1124 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 CYP3A5P20815 502 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 PNPLA4P41247 253 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 ADAT2Q7Z6V5 191 aaKnown RBP28.55■■■□□ 2.16
COL13A1-212ENST00000520133 SLC13A5Q86YT5 568 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-212ENST00000520133 SMG8Q8ND04 991 aaKnown RBP28.55■■■□□ 2.16
COL13A1-212ENST00000520133 ZNF560Q96MR9 790 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 RNF39Q9H2S5 420 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 VIPAS39Q9H9C1 493 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 CREBZFQ9NS37 354 aa28.55■■■□□ 2.16
COL13A1-212ENST00000520133 O00370 1275 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 PPEF2O14830 753 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 PTPN20Q4JDL3 420 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 EIF1ADQ8N9N8 165 aaKnown RBP28.54■■■□□ 2.16
COL13A1-212ENST00000520133 C18orf8Q96DM3 657 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 SENP6Q9GZR1 1112 aaPredicted RBP28.54■■■□□ 2.16
COL13A1-212ENST00000520133 PLEKHA4Q9H4M7 779 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 SYNCQ9H7C4 482 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 CHST12Q9NRB3 414 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.54■■■□□ 2.16
COL13A1-212ENST00000520133 ST3GAL5Q9UNP4 418 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 NR2E1Q9Y466 385 aa28.54■■■□□ 2.16
COL13A1-212ENST00000520133 M0QYV0 167 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 PIRO00625 290 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 RPL7AP62424 266 aaKnown RBP28.53■■■□□ 2.16
COL13A1-212ENST00000520133 FBXO47Q5MNV8 452 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 IFT81Q8WYA0 676 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.53■■■□□ 2.16
COL13A1-212ENST00000520133 MCEEQ96PE7 176 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 PHF2O75151 1096 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 CTSHP09668 335 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 PPP1R15BQ5SWA1 713 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 CCSAPQ6IQ19 270 aaPredicted RBP28.53■■■□□ 2.16
COL13A1-212ENST00000520133 HACE1Q8IYU2 909 aa28.53■■■□□ 2.16
COL13A1-212ENST00000520133 ESYT3A0FGR9 886 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 ZSCAN5CA6NGD5 496 aaPredicted RBP28.52■■■□□ 2.16
COL13A1-212ENST00000520133 TRPA1O75762 1119 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 GJB6O95452 261 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 CHRNA3P32297 505 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 CARSP49589 748 aaKnown RBP28.52■■■□□ 2.16
COL13A1-212ENST00000520133 GSCP56915 257 aaPredicted RBP28.52■■■□□ 2.16
COL13A1-212ENST00000520133 NFX1Q12986 1120 aaKnown RBP28.52■■■□□ 2.16
COL13A1-212ENST00000520133 CUL1Q13616 776 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 DHX34Q14147 1143 aaKnown RBP28.52■■■□□ 2.16
COL13A1-212ENST00000520133 CYP4A22Q5TCH4 519 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 UNC93AQ86WB7 457 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 MAIP1Q8WWC4 291 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 CASKIN2Q8WXE0 1202 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 ERVK-5Q9HDB9 667 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 CYTH4Q9UIA0 394 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 USTQ9Y2C2 406 aa28.52■■■□□ 2.16
COL13A1-212ENST00000520133 GPR182O15218 404 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 CHRNA1P02708 482 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 PIGHQ14442 188 aaPredicted RBP28.51■■■□□ 2.15
COL13A1-212ENST00000520133 SMC1AQ14683 1233 aaKnown RBP28.51■■■□□ 2.15
COL13A1-212ENST00000520133 PTGISQ16647 500 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 LCLAT1Q6UWP7 414 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 SND1Q7KZF4 910 aaKnown RBP eCLIP28.51■■■□□ 2.15
COL13A1-212ENST00000520133 DPH6Q7L8W6 267 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 RNF180Q86T96 592 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 CD99L2Q8TCZ2 262 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 WNT8BQ93098 351 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 DDX27Q96GQ7 796 aaKnown RBP28.51■■■□□ 2.15
COL13A1-212ENST00000520133 MRPL45Q9BRJ2 306 aaKnown RBP28.51■■■□□ 2.15
COL13A1-212ENST00000520133 NFU1Q9UMS0 254 aa28.51■■■□□ 2.15
COL13A1-212ENST00000520133 UTP11Q9Y3A2 253 aaKnown RBP28.51■■■□□ 2.15
COL13A1-212ENST00000520133 CABYRO75952 493 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 GPD2P43304 727 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 PSMC1P62191 440 aaKnown RBP28.5■■■□□ 2.15
COL13A1-212ENST00000520133 NNTQ13423 1086 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 ZNF268Q14587 947 aaPredicted RBP28.5■■■□□ 2.15
COL13A1-212ENST00000520133 CAVIN3Q969G5 261 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 RUNDC3BQ96NL0 473 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 CPXM1Q96SM3 734 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 DNAI2Q9GZS0 605 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 MIS12Q9H081 205 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 RAB17Q9H0T7 212 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 DDX20Q9UHI6 824 aaKnown RBP28.5■■■□□ 2.15
COL13A1-212ENST00000520133 SIGLEC16A6NMB1 481 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 TTI1O43156 1089 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms