RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 C11orf70Q9BRQ4 267 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 NUP85Q9BW27 656 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 HIPK3Q9H422 1215 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 ADAM22Q9P0K1 906 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 SNX12Q9UMY4 172 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 COG5Q9UP83 839 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
SPIDR-209ENST00000519141 A8MXQ7 604 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 INPPL1O15357 1258 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 NCK2O43639 380 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 BUB1BO60566 1050 aaPredicted RBP13.15□□□□□ -0.31
SPIDR-209ENST00000519141 POMCP01189 267 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 COL6A1P12109 1028 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 TCP1P17987 556 aaKnown RBP13.15□□□□□ -0.31
SPIDR-209ENST00000519141 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.31
SPIDR-209ENST00000519141 STILQ15468 1287 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 PLEKHG4Q58EX7 1191 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 C1orf53Q5VUE5 145 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 MMS22LQ6ZRQ5 1243 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 PEX26Q7Z412 305 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 SLFN11Q7Z7L1 901 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 ADGRF2Q8IZF7 708 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 APBB2Q92870 758 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 CARD6Q9BX69 1037 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 TLR10Q9BXR5 811 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 LHX5Q9H2C1 402 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 SNX25Q9H3E2 840 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 L1RE1Q9UN81 338 aa13.15□□□□□ -0.31
SPIDR-209ENST00000519141 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.15□□□□□ -0.31
SPIDR-209ENST00000519141 CASTOR2A6NHX0 329 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 M0QYV0 167 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 O00370 1275 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 PARNO95453 639 aaKnown RBP13.14□□□□□ -0.31
SPIDR-209ENST00000519141 CALB1P05937 261 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 PRLRP16471 622 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 MMP8P22894 467 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 RRM1P23921 792 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
SPIDR-209ENST00000519141 CLCNKBP51801 687 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 FAM189BP81408 668 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 TUSC3Q13454 348 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 CNGA2Q16280 664 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 C11orf63Q6NUN7 778 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 DENND1BQ6P3S1 775 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 DPH6Q7L8W6 267 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 CEP112Q8N8E3 955 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 DBF4BQ8NFT6 615 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 URGCPQ8TCY9 931 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 KBTBD7Q8WVZ9 684 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
SPIDR-209ENST00000519141 UROC1Q96N76 676 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 GOLPH3Q9H4A6 298 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 C11orf49Q9H6J7 331 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 CACNG4Q9UBN1 327 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 SCINQ9Y6U3 715 aa13.14□□□□□ -0.31
SPIDR-209ENST00000519141 CYB561D2O14569 222 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 MICAL2O94851 1124 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 WARSP23381 471 aaKnown RBP13.13□□□□□ -0.31
SPIDR-209ENST00000519141 GNL1P36915 607 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-209ENST00000519141 FAAP100Q0VG06 881 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 GPNMBQ14956 572 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 RPS6KA1Q15418 735 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 ACOT1Q86TX2 421 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 ERICH1Q86X53 443 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 PDCL2Q8N4E4 241 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 OSBPL9Q96SU4 736 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 PPP1R12CQ9BZL4 782 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 MRPL47Q9HD33 250 aaKnown RBP13.13□□□□□ -0.31
SPIDR-209ENST00000519141 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 CHORDC1Q9UHD1 332 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-209ENST00000519141 AMFRQ9UKV5 643 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 NR2E3Q9Y5X4 410 aa13.13□□□□□ -0.31
SPIDR-209ENST00000519141 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 KIF4AO95239 1232 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 FAM163BP0C2L3 166 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 FGFR1P11362 822 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 DNA2P51530 1060 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 CCL23P55773 120 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PTP4A2Q12974 167 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 UPP1Q16831 310 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 GOLGA7BQ2TAP0 167 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 C2CD6Q53TS8 623 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 CLLU1OSQ5K130 101 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 DSTYKQ6XUX3 929 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 NT5DC3Q86UY8 548 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 SCLYQ96I15 445 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 CAPZA3Q96KX2 299 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 SENP8Q96LD8 212 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 PSMB7Q99436 277 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
SPIDR-209ENST00000519141 ELAC1Q9H777 363 aaKnown RBP13.12□□□□□ -0.31
SPIDR-209ENST00000519141 TSPAN16Q9UKR8 245 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms