RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 SIX2Q9NPC8 291 aa22.74■■□□□ 1.23
PCM1-210ENST00000518936 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.74■■□□□ 1.23
PCM1-210ENST00000518936 TIMM13Q9Y5L4 95 aaPredicted RBP22.74■■□□□ 1.23
PCM1-210ENST00000518936 C2CD2LO14523 706 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 NCK2O43639 380 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 KRT5P13647 590 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 CPB1P15086 417 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 CDC25BP30305 580 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 PTK2Q05397 1052 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 ARHGAP44Q17R89 818 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 CRYBG2Q8N1P7 616 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 SHC3Q92529 594 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 TMEM176AQ96HP8 235 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 SYT15Q9BQS2 421 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 HSFX1Q9UBD0 423 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 CNTN6Q9UQ52 1028 aa22.73■■□□□ 1.23
PCM1-210ENST00000518936 MED7O43513 233 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 KLRC2P26717 231 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 NDST1P52848 882 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 CDH8P55286 799 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 SLC8A3P57103 927 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 INTS6LQ5JSJ4 861 aaKnown RBP22.72■■□□□ 1.23
PCM1-210ENST00000518936 IQCEQ6IPM2 695 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 TMEM270Q6UE05 265 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 TAS1R1Q7RTX1 841 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 TMEM130Q8N3G9 435 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 B3GALNT2Q8NCR0 500 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 FUBP3Q96I24 572 aaKnown RBP eCLIP22.72■■□□□ 1.23
PCM1-210ENST00000518936 MRPL45Q9BRJ2 306 aaKnown RBP22.72■■□□□ 1.23
PCM1-210ENST00000518936 NAA15Q9BXJ9 866 aaKnown RBP22.72■■□□□ 1.23
PCM1-210ENST00000518936 NSUN3Q9H649 340 aaKnown RBP22.72■■□□□ 1.23
PCM1-210ENST00000518936 LUC7L2Q9Y383 392 aaKnown RBP22.72■■□□□ 1.23
PCM1-210ENST00000518936 FHOD1Q9Y613 1164 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 CDY1Q9Y6F8 540 aa22.72■■□□□ 1.23
PCM1-210ENST00000518936 COL4A4P53420 1690 aaPredicted RBP22.71■■□□□ 1.23
PCM1-210ENST00000518936 C2orf71A6NGG8 1288 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 LILRB3O75022 631 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 POU3F3P20264 500 aaPredicted RBP22.71■■□□□ 1.23
PCM1-210ENST00000518936 ELF1P32519 619 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 USP8P40818 1118 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 ERVFC1P60507 584 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 GPR17Q13304 367 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 RAB33AQ14088 237 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 DRAP1Q14919 205 aaPredicted RBP22.71■■□□□ 1.23
PCM1-210ENST00000518936 CNGA4Q8IV77 575 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 DRC7Q8IY82 874 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 SPPL2BQ8TCT7 592 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 HDAC7Q8WUI4 952 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 ZCWPW1Q9H0M4 648 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 ABCB6Q9NP58 842 aa22.71■■□□□ 1.23
PCM1-210ENST00000518936 F8VZ95 297 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 TBC1D4O60343 1298 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 NOL4O94818 638 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 PDGFRBP09619 1106 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 VDRP11473 427 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 PTPN1P18031 435 aaKnown RBP22.7■■□□□ 1.22
PCM1-210ENST00000518936 OR1D2P34982 312 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 RAP1GAPP47736 663 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 ZBED6P86452 979 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 RBBP8NLQ8NC74 664 aaPredicted RBP22.7■■□□□ 1.22
PCM1-210ENST00000518936 ZNF461Q8TAF7 563 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 MYCBPAPQ8TBZ2 947 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 HEXIM2Q96MH2 286 aaKnown RBP22.7■■□□□ 1.22
PCM1-210ENST00000518936 KREMEN1Q96MU8 473 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 ARID3AQ99856 593 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 NLRC4Q9NPP4 1024 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 ZNHIT6Q9NWK9 470 aaKnown RBP22.7■■□□□ 1.22
PCM1-210ENST00000518936 IMPACTQ9P2X3 320 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 AFF4Q9UHB7 1163 aaKnown RBP22.7■■□□□ 1.22
PCM1-210ENST00000518936 CAPN11Q9UMQ6 739 aa22.7■■□□□ 1.22
PCM1-210ENST00000518936 LAMA2P24043 3122 aaKnown RBP22.69■■□□□ 1.22
PCM1-210ENST00000518936 LRRN2O75325 713 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 ADCY5O95622 1261 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 GLUD1P00367 558 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 FERP16591 822 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 ACO1P21399 889 aaKnown RBP22.69■■□□□ 1.22
PCM1-210ENST00000518936 IGFBP6P24592 240 aaPredicted RBP22.69■■□□□ 1.22
PCM1-210ENST00000518936 SOX5P35711 763 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 PDE6CP51160 858 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 MEA1Q16626 185 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 SGO2Q562F6 1265 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 SCARA3Q6AZY7 606 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 PRSS55Q6UWB4 352 aaPredicted RBP22.69■■□□□ 1.22
PCM1-210ENST00000518936 CCDC149Q6ZUS6 474 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 ZNF677Q86XU0 584 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 SPATA2LQ8IUW3 424 aaPredicted RBP22.69■■□□□ 1.22
PCM1-210ENST00000518936 FAM71AQ8IYT1 594 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 UBR7Q8N806 425 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 SYN2Q92777 582 aaPredicted RBP22.69■■□□□ 1.22
PCM1-210ENST00000518936 B3GALT6Q96L58 329 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 CEP295NLQ96MC4 621 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 KLHL5Q96PQ7 755 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 CLSTN3Q9BQT9 956 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 ELOVL4Q9GZR5 314 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 SDCBP2Q9H190 292 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 TTYH1Q9H313 450 aaPredicted RBP22.69■■□□□ 1.22
PCM1-210ENST00000518936 PLEKHA4Q9H4M7 779 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 TLE6Q9H808 572 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 PCDHB5Q9Y5E4 795 aa22.69■■□□□ 1.22
PCM1-210ENST00000518936 BZW2Q9Y6E2 419 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms