RNA–Protein interactions for RNA: ENST00000517924.5

LAPTM4B-202, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 5

Gene LAPTM4B, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-202ENST00000517924 HUS1O60921 280 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 TNNC2P02585 160 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 GRM2Q14416 872 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 PSMD6Q15008 389 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 DUOXA2Q1HG44 320 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 SOWAHAQ2M3V2 549 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 GAREM2Q75VX8 874 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 HS2ST1Q7LGA3 356 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 WDR49Q8IV35 697 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 FSIP1Q8NA03 581 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 STKLD1Q8NE28 680 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 PSMG2Q969U7 264 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 SCAND2PQ9GZW5 306 aaPredicted RBP26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 DDX43Q9NXZ2 648 aaKnown RBP26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 USP25Q9UHP3 1055 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 ATP6V1DQ9Y5K8 247 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 COL4A2P08572 1712 aa26.51■■□□□ 1.83
LAPTM4B-202ENST00000517924 HAPLN1P10915 354 aaPredicted RBP26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 VIPR2P41587 438 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 SURF1Q15526 300 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 ALYREFQ86V81 257 aaKnown RBP26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 GPIHBP1Q8IV16 184 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 C12orf56Q8IXR9 622 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 ADGRF2Q8IZF7 708 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 LEMD2Q8NC56 503 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 ZSCAN18Q8TBC5 510 aaPredicted RBP26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 PLEKHO2Q8TD55 490 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 GIPC2Q8TF65 315 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 ZNF516Q92618 1163 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 ELSPBP1Q96BH3 223 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 HPDLQ96IR7 371 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 CGRRF1Q99675 332 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 FOXQ1Q9C009 403 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 HSFX1Q9UBD0 423 aa26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 NUP210Q8TEM1 1887 aaPredicted RBP26.5■■□□□ 1.83
LAPTM4B-202ENST00000517924 CST3P01034 146 aaPredicted RBP26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 CASP4P49662 377 aa26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 GPR15P49685 360 aa26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 SNRPFP62306 86 aaKnown RBP26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 TRAPPC11Q7Z392 1133 aa26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 DCP1BQ8IZD4 617 aaKnown RBP26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 PKMYT1Q99640 499 aa26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 PI4K2AQ9BTU6 479 aa26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 SLITRK6Q9H5Y7 841 aa26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 ZFP14Q9HCL3 533 aa26.49■■□□□ 1.83
LAPTM4B-202ENST00000517924 A0A1W2PQ27 194 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 A0A1W2PQ64 194 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 A0A1W2PQD8 194 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 RPN1P04843 607 aaKnown RBP26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 TNNI1P19237 187 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 RFX1P22670 979 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 TUFMP49411 452 aaKnown RBP26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 SLC44A4Q53GD3 710 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 VITQ6UXI7 678 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 TMEM86AQ8N2M4 240 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 TOP6BLQ8N6T0 577 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 FAM200AQ8TCP9 573 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 SPPL2BQ8TCT7 592 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 KBTBD7Q8WVZ9 684 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 SMARCD2Q92925 531 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 RSPRY1Q96DX4 576 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 FNBP1Q96RU3 617 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 ACBD6Q9BR61 282 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 MKNK1Q9BUB5 465 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 KCTD10Q9H3F6 313 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 ASB3Q9Y575 518 aa26.48■■□□□ 1.83
LAPTM4B-202ENST00000517924 PTPRDP23468 1912 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 GABRDO14764 452 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 EXOC3O60645 756 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 LRRN2O75325 713 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 DCNP07585 359 aaKnown RBP26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 GABRR2P28476 465 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 NUBP1P53384 320 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 TSPY1Q01534 308 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 MYO1EQ12965 1108 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 BECN1Q14457 450 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 MLF2Q15773 248 aaPredicted RBP26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 INTS6LQ5JSJ4 861 aaKnown RBP26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 SDHAF4Q5VUM1 108 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 PHLDB3Q6NSJ2 640 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 LIMS2Q7Z4I7 341 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 C2orf15Q8WU43 125 aaKnown RBP26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 IL21Q9HBE4 155 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 CGNQ9P2M7 1197 aaKnown RBP26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 GTF3C4Q9UKN8 822 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 PCDHB5Q9Y5E4 795 aa26.47■■□□□ 1.83
LAPTM4B-202ENST00000517924 ZNF638Q14966 1978 aaKnown RBP26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 GREB1Q4ZG55 1949 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 ATP2C2O75185 946 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 CD72P21854 359 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 LMO2P25791 158 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 MRE11P49959 708 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 STARD6P59095 220 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 DPYDQ12882 1025 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 PSMD2Q13200 908 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 KRBA2Q6ZNG9 492 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 CCDC105Q8IYK2 499 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 DMAC2Q9NW81 257 aa26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 MTF2Q9Y483 593 aaPredicted RBP26.46■■□□□ 1.83
LAPTM4B-202ENST00000517924 CYP2F1P24903 491 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms