RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 CAMKK1Q8N5S9 505 aa6.64□□□□□ -1.35
SCARNA1-201ENST00000517138 ZBTB34Q8NCN2 500 aa6.64□□□□□ -1.35
SCARNA1-201ENST00000517138 BRIX1Q8TDN6 353 aaKnown RBP6.64□□□□□ -1.35
SCARNA1-201ENST00000517138 AIFM3Q96NN9 605 aa6.64□□□□□ -1.35
SCARNA1-201ENST00000517138 AMBRA1Q9C0C7 1298 aa6.64□□□□□ -1.35
SCARNA1-201ENST00000517138 NMRK2Q9NPI5 230 aa6.64□□□□□ -1.35
SCARNA1-201ENST00000517138 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 C1QL1O75973 258 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 UNC5CO95185 931 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 SCGB1D2O95969 90 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 PIM1P11309 404 aaPredicted RBP6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 HTR1BP28222 390 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 RBM20Q5T481 1227 aaKnown RBP6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 STRIP1Q5VSL9 837 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 KAZNQ674X7 775 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 PRIMA1Q86XR5 153 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 DENND1CQ8IV53 801 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 B3GALNT2Q8NCR0 500 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 SLC9A6Q92581 669 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 MRGPRX1Q96LB2 322 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 ADGRA2Q96PE1 1338 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 P2RX7Q99572 595 aaKnown RBP6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 TTYH3Q9C0H2 523 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 KIAA1586Q9HCI6 787 aa6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCARNA1-201ENST00000517138 SPATA31A3Q5VYP0 1347 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 WDR27A2RRH5 827 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 MPPED1O15442 326 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 GNAI2P04899 355 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 HSPA6P17066 643 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 GCLCP48506 637 aaPredicted RBP6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 SP2Q02086 613 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 EMC10Q5UCC4 262 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 OVCH2Q7RTZ1 564 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 ARHGEF25Q86VW2 580 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 ZNF575Q86XF7 245 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 CAGE1Q8TC20 777 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 SLC46A1Q96NT5 459 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 CAMKK2Q96RR4 588 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 DUSP26Q9BV47 211 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 TPSD1Q9BZJ3 242 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 KLK15Q9H2R5 256 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 SERHLQ9NQF3 203 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 ASB6Q9NWX5 421 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 DKK3Q9UBP4 350 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 INSL6Q9Y581 213 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 RAD54BQ9Y620 910 aa6.62□□□□□ -1.35
SCARNA1-201ENST00000517138 A0A088AWK7 358 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 H3BML4 177 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 PTPRRQ15256 657 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 NFE2Q16621 373 aaPredicted RBP6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 ERCC6LQ2NKX8 1250 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 FAM160B1Q5W0V3 765 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 RD3Q7Z3Z2 195 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 FAM109AQ8N4B1 249 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.61□□□□□ -1.355e-11■■■□□ 15.9
SCARNA1-201ENST00000517138 BOLLQ8N9W6 283 aaKnown RBP6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 PGBD1Q96JS3 809 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 ACTRT3Q9BYD9 372 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 ZMAT3Q9HA38 289 aaKnown RBP6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 HESX1Q9UBX0 185 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 G3BP2Q9UN86 482 aaKnown RBP6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 ST3GAL5Q9UNP4 418 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 EID1Q9Y6B2 187 aa6.61□□□□□ -1.35
SCARNA1-201ENST00000517138 SPATA31A6Q5VVP1 1343 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 LRRC3CA6NJW4 275 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 LINC00473A8K010 186 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 IGLV2-14P01704 120 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 ERBB2P04626 1255 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 NPR1P16066 1061 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 KCNJ5P48544 419 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 CACNA2D1P54289 1103 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 GTF2H3Q13889 308 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 SWSAP1Q6NVH7 229 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 TMEM108Q6UXF1 575 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 OSBPL9Q96SU4 736 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 ATP6V0A4Q9HBG4 840 aa6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 SARS2Q9NP81 518 aaKnown RBP6.6□□□□□ -1.35
SCARNA1-201ENST00000517138 PPM1DO15297 605 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 S100BP04271 92 aaPredicted RBP6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 GRPP07492 148 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 ITGALP20701 1170 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 CD6P30203 668 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 GRIA3P42263 894 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 EIF2B5Q13144 721 aaKnown RBP6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 FGL2Q14314 439 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 DPY19L2P1Q6NXN4 242 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 JDP2Q8WYK2 163 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 RFKQ969G6 155 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 RUNDC1Q96C34 613 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 HEPHQ9BQS7 1158 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 B3GNT5Q9BYG0 378 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 SIK2Q9H0K1 926 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 KLC4Q9NSK0 619 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 SEMA4GQ9NTN9 838 aa6.59□□□□□ -1.35
SCARNA1-201ENST00000517138 A6NNZ2 444 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 TRIAP1O43715 76 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 PPFIA2O75334 1257 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 TUSC2O75896 110 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 KITP10721 976 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms