RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 LPIN3Q9BQK8 851 aa15.76■□□□□ 0.11
SCARNA20.5-201ENST00000516991 THG1LQ9NWX6 298 aaKnown RBP15.76■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CDV3Q9UKY7 258 aaKnown RBP15.76■□□□□ 0.11
SCARNA20.5-201ENST00000516991 USP18Q9UMW8 372 aa15.76■□□□□ 0.11
SCARNA20.5-201ENST00000516991 NCOR2Q9Y618 2525 aa15.76■□□□□ 0.11
SCARNA20.5-201ENST00000516991 DENND4CQ5VZ89 1909 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 MED19A0JLT2 244 aaPredicted RBP15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 KPNA7A9QM74 516 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 PRAMEF12O95522 483 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 HAPLN1P10915 354 aaPredicted RBP15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 DDX6P26196 483 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CNR2P34972 360 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CYP4F8P98187 520 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 TSPY1Q01534 308 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SATB1Q01826 763 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ALCAMQ13740 583 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 PTPAQ15257 358 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 L1TD1Q5T7N2 865 aaKnown RBP15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 WSCD1Q658N2 575 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 DYMQ7RTS9 669 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SYNPOQ8N3V7 929 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 EPSTI1Q96J88 318 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ACCSQ96QU6 501 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 MRPL44Q9H9J2 332 aaKnown RBP15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 IL21Q9HBE4 155 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ABI2Q9NYB9 513 aaPredicted RBP15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 PCDHB5Q9Y5E4 795 aa15.75■□□□□ 0.11
SCARNA20.5-201ENST00000516991 LDHAP00338 332 aaKnown RBP15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SOX9P48436 509 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CUL4AQ13619 759 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 GAS6Q14393 721 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 NFE2Q16621 373 aaPredicted RBP15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ITPRIPL2Q3MIP1 535 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 RRAGBQ5VZM2 374 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CRELD2Q6UXH1 353 aaPredicted RBP15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SV2BQ7L1I2 683 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 BRSK2Q8IWQ3 736 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 LEO1Q8WVC0 666 aaPredicted RBP15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 STRA6Q9BX79 667 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 KIF9Q9HAQ2 790 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 OLFML3Q9NRN5 406 aa15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 FBXO2Q9UK22 296 aaPredicted RBP15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SRPRBQ9Y5M8 271 aaKnown RBP15.74■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ZNF638Q14966 1978 aaKnown RBP15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SOBPA7XYQ1 873 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 GCNT3O95395 438 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 RETP07949 1114 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CSH1P0DML2 217 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CSH2P0DML3 217 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 GARTP22102 1010 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ADSSP30520 456 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 HOXA6P31267 233 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 TXNDC11Q6PKC3 985 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CCDC73Q6ZRK6 1079 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 PRR23BQ6ZRT6 265 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 USP49Q70CQ1 688 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 LONP2Q86WA8 852 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CMTM8Q8IZV2 173 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 TMEM86AQ8N2M4 240 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 LRRC52Q8N7C0 313 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SPATA18Q8TC71 538 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 GIPC2Q8TF65 315 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CACTINQ8WUQ7 758 aaKnown RBP15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ZFYVE19Q96K21 471 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 LRRC3BQ96PB8 259 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 FAM213AQ9BRX8 229 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 RTKNQ9BST9 563 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ABCB6Q9NP58 842 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 RBM12Q9NTZ6 932 aaKnown RBP15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 GTSE1Q9NYZ3 720 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CLIC4Q9Y696 253 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 OBSL1O75147 1896 aa15.73■□□□□ 0.11
SCARNA20.5-201ENST00000516991 MYMKA6NI61 221 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 K7ESF4 209 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 POLR2BP30876 1174 aaKnown RBP15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 AVPR1AP37288 418 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 NLRP12P59046 1061 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 TFAMQ00059 246 aaKnown RBP15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CCINQ13939 588 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SIM2Q14190 667 aaPredicted RBP15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 PON2Q15165 354 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 Q6ZS52 159 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 LRRTM3Q86VH5 581 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 GPIHBP1Q8IV16 184 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SYCP3Q8IZU3 236 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 MRPS31Q92665 395 aaKnown RBP15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 DNAJC19Q96DA6 116 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SLC46A2Q9BY10 475 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 RBAKQ9NYW8 714 aaPredicted RBP15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 UXTQ9UBK9 157 aaPredicted RBP15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ITGA11Q9UKX5 1188 aa15.72■□□□□ 0.11
SCARNA20.5-201ENST00000516991 CHURC1-FNTBB4DL54 471 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 KIAA0391O15091 583 aaKnown RBP15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 FOXD2O60548 495 aaPredicted RBP15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 HUS1O60921 280 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ITGB3P05106 788 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 TGM1P22735 817 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 STAT6P42226 847 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms