RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PJA1Q8NG27 643 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 DCAF4Q8WV16 495 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 KCTD13Q8WZ19 329 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 SCMH1Q96GD3 660 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 MED15Q96RN5 788 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 ZFYVE21Q9BQ24 234 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 ALG8Q9BVK2 526 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 TINAGL1Q9GZM7 467 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 CDT1Q9H211 546 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 DDX31Q9H8H2 851 aaKnown RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 SLTMQ9NWH9 1034 aaKnown RBP eCLIP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 EHD3Q9NZN3 535 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 SYNPO2Q9UMS6 1093 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 NR2E3Q9Y5X4 410 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 PRSS21Q9Y6M0 314 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 PCNX3Q9H6A9 2034 aa-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 SOS1Q07889 1333 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-542P-201ENST00000516405 TMEM272A0A1B0GTI8 110 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 TCRBV5S1A1TA0A578 114 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 TCP11X1B4DZS4 312 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ZNF814B7Z6K7 855 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 H7C1Q1 480 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 OPHN1O60890 802 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 NDUFB8O95169 186 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ANOS1P23352 680 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 BCAR1P56945 870 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 RPS7P62081 194 aaKnown RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 LACTBP83111 547 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 SLFN5Q08AF3 891 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ARL16Q0P5N6 197 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ST3GAL1Q11201 340 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 BMPR2Q13873 1038 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 CERKLQ49MI3 558 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 WASHC2DQ5SRD0 308 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ZC2HC1BQ5TFG8 222 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 UNQ6494/PRO21346Q6UXR6 183 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 C16orf59Q7L2K0 433 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ZNF804AQ7Z570 1209 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ZNF584Q8IVC4 421 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 C19orf47Q8N9M1 422 aaKnown RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 OSR1Q8TAX0 266 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 PNKPQ96T60 521 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 FDXACB1Q9BRP7 624 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 SEZ6LQ9BYH1 1024 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 RBM38Q9H0Z9 239 aaKnown RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ABHD16BQ9H3Z7 469 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 MTG2Q9H4K7 406 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 FBXO34Q9NWN3 711 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 DDX43Q9NXZ2 648 aaKnown RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 G3BP2Q9UN86 482 aaKnown RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 CELA1Q9UNI1 258 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 TNPO3Q9Y5L0 923 aaKnown RBP-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 ZHX2Q9Y6X8 837 aa-0.16□□□□□ -2.44
RNU6-542P-201ENST00000516405 TDRD15B5MCY1 1934 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 LOC102724159A0A0B4J2E5 919 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 A0A1W2PR48 441 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 PLSCR5A0PG75 271 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 BLACEA4D250 179 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 FOXH1O75593 365 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 SNRNP70P08621 437 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 SNRPA1P09661 255 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 PRKCSHP14314 528 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 GATA2P23769 480 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 CYP2C18P33260 490 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 FLT3LGP49771 235 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 NR0B1P51843 470 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 KRTAP12-3P60328 96 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 RPS13P62277 151 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 PMP22Q01453 160 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 DYRK1AQ13627 763 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 HABP2Q14520 560 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 PWP2Q15269 919 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 FAM47AQ5JRC9 791 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 RBM20Q5T481 1227 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 PRAMEF9Q5VWM5 478 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 STYK1Q6J9G0 422 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 ZNF774Q6NX45 483 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 KIRREL2Q6UWL6 708 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 CCDC81Q6ZN84 652 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 FAM83HQ6ZRV2 1179 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 ESPNLQ6ZVH7 1005 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 ADGRG5Q8IZF4 528 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 IL17RCQ8NAC3 791 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 PCDH19Q8TAB3 1148 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 FBXW5Q969U6 566 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 ASB16Q96NS5 453 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 CTRCQ99895 268 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 NOL10Q9BSC4 688 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 ALG1Q9BT22 464 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 IER2Q9BTL4 223 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 RBM4Q9BWF3 364 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 FAM30AQ9NZY2 134 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 CTTNBP2NLQ9P2B4 639 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 LRP2BPQ9P2M1 347 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 BIN2Q9UBW5 565 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 MED16Q9Y2X0 877 aa-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 SYNE2Q8WXH0 6885 aaKnown RBP-0.17□□□□□ -2.44
RNU6-542P-201ENST00000516405 RP1L1Q8IWN7 2480 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-542P-201ENST00000516405 ATRNL1Q5VV63 1379 aa-0.18□□□□□ -2.44
RNU6-542P-201ENST00000516405 MEIOCA2RUB1 952 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms