RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 PLAURQ03405 335 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 MCL1Q07820 350 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 KCNA1Q09470 495 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CCDC15Q0P6D6 951 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 MESP2Q0VG99 397 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 TCP10Q12799 353 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 USP4Q13107 963 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 DMP1Q13316 513 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PDCLQ13371 301 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 MTMR1Q13613 665 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ACVR2BQ13705 512 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SLC29A2Q14542 456 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 STAT4Q14765 748 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 MTFR1Q15390 333 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 UAP1Q16222 522 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PCSK7Q16549 785 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SNRNP35Q16560 246 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 KRT71Q3SY84 523 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZNF568Q3ZCX4 644 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 USH1GQ495M9 461 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CBWD6Q4V339 395 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZC2HC1CQ53FD0 456 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CBWD3Q5JTY5 395 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CBWD5Q5RIA9 395 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 LIN9Q5TKA1 542 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 KCTD16Q68DU8 428 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CCDC137Q6PK04 289 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 C4orf22Q6V702 233 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PPP1R21Q6ZMI0 780 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 C15orf39Q6ZRI6 1047 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 MIGA2Q7L4E1 593 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PHF13Q86YI8 300 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 TDRPQ86YL5 185 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 MAP4K3Q8IVH8 894 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZFPM1Q8IX07 1006 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 RHOT1Q8IXI2 618 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CCDC105Q8IYK2 499 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 DAW1Q8N136 415 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 GPD1LQ8N335 351 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 TTC39CQ8N584 583 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PRELID2Q8N945 189 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CCDC197Q8NCU1 140 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 EXD1Q8NHP7 514 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 GIMAP7Q8NHV1 300 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CYP2W1Q8TAV3 490 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 NSUN6Q8TEA1 469 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PIGOQ8TEQ8 1089 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 TMEM40Q8WWA1 233 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ATXN2LQ8WWM7 1075 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CCT6BQ92526 530 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 RAPGEF5Q92565 580 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 APBB2Q92870 758 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZNF622Q969S3 477 aaKnown RBP eCLIP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SNF8Q96H20 258 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SGSM3Q96HU1 749 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 FAM46AQ96IP4 442 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SEC16BQ96JE7 1060 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 IFT74Q96LB3 600 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CCDC114Q96M63 670 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 TTC25Q96NG3 672 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 GPR101Q96P66 508 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZNF317Q96PQ6 595 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 XPO6Q96QU8 1125 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PSMB7Q99436 277 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 P2RX7Q99572 595 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 NCAPGQ9BPX3 1015 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 LXNQ9BS40 222 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 WDR18Q9BV38 432 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 AP1M1Q9BXS5 423 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 FRMD8Q9BZ67 464 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 TMEM117Q9H0C3 514 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 UNC45AQ9H3U1 944 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 TDRD3Q9H7E2 651 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SLC38A10Q9HBR0 1119 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 AGO4Q9HCK5 861 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SSU72Q9NP77 194 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 OSGEPQ9NPF4 335 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PPANQ9NQ55 473 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 KMT5AQ9NQR1 393 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PAK6Q9NQU5 681 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PDLIM7Q9NR12 457 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 KLC4Q9NSK0 619 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 INTS9Q9NV88 658 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 HAUS2Q9NVX0 235 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 GEMIN8Q9NWZ8 242 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 HOXC10Q9NYD6 342 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SAMD15Q9P1V8 674 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZNF70Q9UC06 446 aaPredicted RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 DDX20Q9UHI6 824 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 NOCTQ9UK39 431 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CCPG1Q9ULG6 757 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ZBTB21Q9ULJ3 1066 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ADAMTS5Q9UNA0 930 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 RPL26L1Q9UNX3 145 aaKnown RBP3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ATP8A1Q9Y2Q0 1164 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 SCINQ9Y6U3 715 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 CAPN7Q9Y6W3 813 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 ANK1P16157 1881 aa3.24□□□□□ -1.89
RN7SKP43-201ENST00000516173 PHIPQ8WWQ0 1821 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms