RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 MON1BQ7L1V2 547 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PEX26Q7Z412 305 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ACOT1Q86TX2 421 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 RTN4RL1Q86UN2 441 aaPredicted RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ERICH1Q86X53 443 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ADGRF2Q8IZF7 708 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CEP112Q8N8E3 955 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LRRC57Q8N9N7 239 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MSANTD4Q8NCY6 345 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C1orf131Q8NDD1 294 aaKnown RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DBF4BQ8NFT6 615 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ZNF564Q8TBZ8 553 aaPredicted RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 URGCPQ8TCY9 931 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LINC01599Q8WXQ3 324 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DDX27Q96GQ7 796 aaKnown RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 UROC1Q96N76 676 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C11orf70Q9BRQ4 267 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 NUP85Q9BW27 656 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TLR10Q9BXR5 811 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MRPL47Q9HD33 250 aaKnown RBP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 AMFRQ9UKV5 643 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 COG5Q9UP83 839 aa8.11□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TTC3P53804 2025 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TMEM110-MUSTN1A8MSY1 372 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 M0QYV0 167 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 NCK2O43639 380 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MICAL2O94851 1124 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 KIF4AO95239 1232 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 FAM163BP0C2L3 166 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 HSPA1AP0DMV8 641 aaKnown RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 HSPA1BP0DMV9 641 aaKnown RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CAPN2P17655 700 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 WARSP23381 471 aaKnown RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 RRM1P23921 792 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GNL1P36915 607 aaPredicted RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CKAP4Q07065 602 aaKnown RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 FAAP100Q0VG06 881 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PTP4A2Q12974 167 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GPNMBQ14956 572 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 UPP1Q16831 310 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GOLGA7BQ2TAP0 167 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 NOMO2Q5JPE7 1267 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C11orf63Q6NUN7 778 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LCLAT1Q6UWP7 414 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DSTYKQ6XUX3 929 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LIMS2Q7Z4I7 341 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TMEM86AQ8N2M4 240 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PDCL2Q8N4E4 241 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 WDTC1Q8N5D0 677 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DIS3LQ8TF46 1054 aaKnown RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 UBE2Q2Q8WVN8 375 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 KBTBD7Q8WVZ9 684 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TNIP3Q96KP6 325 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CAPZA3Q96KX2 299 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SENP8Q96LD8 212 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 OSBPL9Q96SU4 736 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PPP1R12CQ9BZL4 782 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 GOLPH3Q9H4A6 298 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C11orf49Q9H6J7 331 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ELAC1Q9H777 363 aaKnown RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PARVAQ9NVD7 372 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 RNF216Q9NWF9 866 aaPredicted RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TMEM161AQ9NX61 479 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 KANSL3Q9P2N6 904 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CACNG4Q9UBN1 327 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CHORDC1Q9UHD1 332 aaPredicted RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ANAPC7Q9UJX3 599 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TSPAN16Q9UKR8 245 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 STRIP2Q9ULQ0 834 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 L1RE1Q9UN81 338 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ATP11BQ9Y2G3 1177 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 NME7Q9Y5B8 376 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PCDHB7Q9Y5E2 793 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SCINQ9Y6U3 715 aa8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 FNDC1Q4ZHG4 1894 aaPredicted RBP8.1□□□□□ -1.11
SCARNA20.1-201ENST00000516009 KIAA0100Q14667 2235 aaKnown RBP8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ARHGEF37A1IGU5 675 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CTAGE15A4D2H0 777 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 EFCAB8A8MWE9 144 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ENPP3O14638 875 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CTIFO43310 598 aaKnown RBP8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SRGAP2O75044 1071 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 B3GAT3O94766 335 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CXCL10P02778 98 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CLTBP09497 229 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 PDGFRBP09619 1106 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CTAGE8P0CG41 777 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 SETSIPP0DME0 302 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 FGFR1P11362 822 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 ODC1P11926 461 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CYP2C18P33260 490 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 LHX1P48742 406 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 DNA2P51530 1060 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 CCL23P55773 120 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 TAP1Q03518 808 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 RNASELQ05823 741 aaKnown RBP8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 MESDQ14696 234 aa8.09□□□□□ -1.11
SCARNA20.1-201ENST00000516009 C2CD6Q53TS8 623 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms