RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 TMEM121Q9BTD3 319 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 MAK16Q9BXY0 300 aaKnown RBP17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 ADAM33Q9BZ11 813 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 CTDP1Q9Y5B0 961 aaPredicted RBP17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 hCG_1818297A0A087WSY0 165 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 ATP2A1O14983 1001 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 FGFR1P11362 822 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 TFDP3Q5H9I0 405 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 HHATQ5VTY9 493 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 TXNRD3NBQ6F5E7 133 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 ACSF2Q96CM8 615 aaPredicted RBP17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 SLC7A6OSQ96CW6 309 aaPredicted RBP17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 ZBTB45Q96K62 511 aaPredicted RBP17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 MCEEQ96PE7 176 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 PCDH9Q9HC56 1237 aa17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 NKX1-2Q9UD57 310 aaPredicted RBP17.73■□□□□ 0.43
TSPAN17-209ENST00000515708 DOCK5Q9H7D0 1870 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 MAFGO15525 162 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 ITGAVP06756 1048 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 PTPN7P35236 360 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 GPX6P59796 221 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 OGDHQ02218 1023 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 MTERF2Q49AM1 385 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 EFHC2Q5JST6 749 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 OR5B17Q8NGF7 314 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 FAXDC2Q96IV6 333 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 JPH1Q9HDC5 661 aaPredicted RBP17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 RIPK3Q9Y572 518 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 MYH9P35579 1960 aaKnown RBP17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 TCRBV5S1A1TA0A578 114 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 SGK1O00141 431 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 BANF1O75531 89 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 RGS20O76081 388 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 IFNB1P01574 187 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 KRT4P19013 534 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 ZNF132P52740 706 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 PLCB3Q01970 1234 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 ZNF449Q6P9G9 518 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 LVRNQ6Q4G3 990 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 OTOAQ7RTW8 1153 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 FAM13CQ8NE31 585 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 CGRRF1Q99675 332 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 TBC1D10AQ9BXI6 508 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 RNPEPL1Q9HAU8 725 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 CYLDQ9NQC7 956 aa17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 SCAF8Q9UPN6 1271 aaKnown RBP17.72■□□□□ 0.43
TSPAN17-209ENST00000515708 LRRD1A4D1F6 860 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 GOLGA8SH3BPF8 625 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 GOLGA8MH3BSY2 632 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 PPP1R12AO14974 1030 aaPredicted RBP17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 CALB1P05937 261 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 CDKN2BP42772 138 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 GEMIN4P57678 1058 aaKnown RBP17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 NCOA4Q13772 614 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 EMC2Q15006 297 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 HIF1AQ16665 826 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 SCARA3Q6AZY7 606 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 DNAJC24Q6P3W2 148 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 ANKMY2Q8IV38 441 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 KCNV2Q8TDN2 545 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 ZNF75CPQ92670 426 aaPredicted RBP17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 TRIM6Q9C030 488 aaPredicted RBP17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 RNF146Q9NTX7 359 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 ANKFY1Q9P2R3 1169 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 CLUHO75153 1309 aa17.71■□□□□ 0.43
TSPAN17-209ENST00000515708 PEX11AO75192 247 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 CBX6O95503 412 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 GNAZP19086 355 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 CDC25CP30307 473 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 ACTR2P61160 394 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 DCUN1D2Q6PH85 259 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 TMEM143Q96AN5 459 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 WNK4Q96J92 1243 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 MSTO1Q9BUK6 570 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 SSU72Q9NP77 194 aaKnown RBP17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 SLC9A2Q9UBY0 812 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 RABGEF1Q9UJ41 708 aa17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 FARP1Q9Y4F1 1045 aaPredicted RBP17.71■□□□□ 0.42
TSPAN17-209ENST00000515708 VWA5AO00534 786 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 NDC80O14777 642 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 ZWINTO95229 277 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 PIGRP01833 764 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 GM2AP17900 193 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 CALB2P22676 271 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 GLRA2P23416 452 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 RASSF2P50749 326 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 RNASELQ05823 741 aaKnown RBP17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 SPDYAQ5MJ70 313 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 SLFN12LQ6IEE8 588 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 CCDC125Q86Z20 511 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 MTMR14Q8NCE2 650 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 SLC35B2Q8TB61 432 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 CYP39A1Q9NYL5 469 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 CNTNAP2Q9UHC6 1331 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 FER1L6Q2WGJ9 1857 aa17.7■□□□□ 0.42
TSPAN17-209ENST00000515708 TRAFD1O14545 582 aaPredicted RBP17.69■□□□□ 0.42
TSPAN17-209ENST00000515708 EPHB2P29323 1055 aa17.69■□□□□ 0.42
TSPAN17-209ENST00000515708 GAD2Q05329 585 aa17.69■□□□□ 0.42
TSPAN17-209ENST00000515708 TFDP1Q14186 410 aa17.69■□□□□ 0.42
TSPAN17-209ENST00000515708 EFTUD2Q15029 972 aaKnown RBP eCLIP17.69■□□□□ 0.429e-8■■■□□ 16.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms