RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 SENP1Q9P0U3 644 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 STRIP2Q9ULQ0 834 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 PPP2R3BQ9Y5P8 575 aa18.48■□□□□ 0.55
SNX2-213ENST00000514949 GJC1P36383 396 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 TAZQ16635 292 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 SEZ6Q53EL9 994 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 RNF43Q68DV7 783 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 GPAT2Q6NUI2 795 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 PRUNE1Q86TP1 453 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 EXOC8Q8IYI6 725 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 DENND1AQ8TEH3 1009 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 SEPT1Q8WYJ6 367 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 FAXDC2Q96IV6 333 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 TGS1Q96RS0 853 aaKnown RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 TACO1Q9BSH4 297 aaKnown RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 MTMR12Q9C0I1 747 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 LHX5Q9H2C1 402 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 CD248Q9HCU0 757 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 SAYSD1Q9NPB0 183 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 FETUBQ9UGM5 382 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 CD2APQ9Y5K6 639 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 A0A0G2JMZ2 1700 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 WDR90Q96KV7 1748 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 IGKV6-21A0A0C4DH24 114 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 C3orf70A6NLC5 250 aaPredicted RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 FOXO6A8MYZ6 492 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 RASA4BC9J798 803 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 RASA4O43374 803 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 UBOX5O94941 541 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 PECAM1P16284 738 aaPredicted RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 ATF7P17544 494 aaPredicted RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 TAC1P20366 129 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 PROZP22891 400 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 BRD2P25440 801 aaKnown RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 GSCP56915 257 aaPredicted RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 MXD4Q14582 209 aaPredicted RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 PREPLQ4J6C6 727 aaPredicted RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 ANGEL2Q5VTE6 544 aaKnown RBP18.47■□□□□ 0.55
SNX2-213ENST00000514949 METTL7BQ6UX53 244 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 ERICH1Q86X53 443 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 RIOX2Q8IUF8 465 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 TCP11Q8WWU5 503 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 XYLT2Q9H1B5 865 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 KLHL11Q9NVR0 708 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 TBK1Q9UHD2 729 aa18.47■□□□□ 0.55
SNX2-213ENST00000514949 EXOC1LA0A1B0GW35 172 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 ASMTLO95671 621 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 HOXC6P09630 235 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 IL9RQ01113 521 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 CCDC15Q0P6D6 951 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 GPS1Q13098 491 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 ZNF268Q14587 947 aaPredicted RBP18.46■□□□□ 0.55
SNX2-213ENST00000514949 KAZNQ674X7 775 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 CCDC91Q7Z6B0 441 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 RPAINQ86UA6 219 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 TFAP2BQ92481 460 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 RXFP1Q9HBX9 757 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 AGAP1Q9UPQ3 857 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 CEP83Q9Y592 693 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 SIGLEC16A6NMB1 481 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 B4GALT4O60513 344 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 SLC8A1P32418 973 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 ASPAP45381 313 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 WDR4P57081 412 aaKnown RBP18.46■□□□□ 0.55
SNX2-213ENST00000514949 NCALDP61601 193 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 TXNRD3NBQ6F5E7 133 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 CGB2Q6NT52 195 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 CYP4F22Q6NT55 531 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 PCGF5Q86SE9 256 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 C2orf40Q9H1Z8 148 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 PTPRHQ9HD43 1115 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 SLC24A2Q9UI40 661 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 FZD1Q9UP38 647 aa18.46■□□□□ 0.55
SNX2-213ENST00000514949 FARP1Q9Y4F1 1045 aaPredicted RBP18.46■□□□□ 0.55
SNX2-213ENST00000514949 ZSCAN5DPP0CG00 497 aa18.45■□□□□ 0.54
SNX2-213ENST00000514949 HARSP12081 509 aaKnown RBP18.45■□□□□ 0.54
SNX2-213ENST00000514949 TCF7P36402 384 aaPredicted RBP18.45■□□□□ 0.54
SNX2-213ENST00000514949 YWHAEP62258 255 aaKnown RBP18.45■□□□□ 0.54
SNX2-213ENST00000514949 LAMTOR4Q0VGL1 99 aa18.45■□□□□ 0.54
SNX2-213ENST00000514949 MAPK6Q16659 721 aa18.45■□□□□ 0.54
SNX2-213ENST00000514949 ZC3H12AQ5D1E8 599 aaKnown RBP18.45■□□□□ 0.54
SNX2-213ENST00000514949 PRAMEF18Q5VWM3 479 aa18.45■□□□□ 0.54
SNX2-213ENST00000514949 TSHZ1Q6ZSZ6 1077 aa18.45■□□□□ 0.54
SNX2-213ENST00000514949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNX2-213ENST00000514949 GDAP1Q8TB36 358 aa18.45■□□□□ 0.54
SNX2-213ENST00000514949 PRCCQ92733 491 aaPredicted RBP18.45■□□□□ 0.54
SNX2-213ENST00000514949 TCHPQ9BT92 498 aa18.45■□□□□ 0.54
SNX2-213ENST00000514949 SMG5Q9UPR3 1016 aaKnown RBP18.45■□□□□ 0.54
SNX2-213ENST00000514949 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
SNX2-213ENST00000514949 SOWAHBA6NEL2 793 aa18.44■□□□□ 0.54
SNX2-213ENST00000514949 LGR5O75473 907 aa18.44■□□□□ 0.54
SNX2-213ENST00000514949 PRKCBP05771 671 aa18.44■□□□□ 0.54
SNX2-213ENST00000514949 POLR2BP30876 1174 aaKnown RBP18.44■□□□□ 0.54
SNX2-213ENST00000514949 FOXN2P32314 431 aa18.44■□□□□ 0.54
SNX2-213ENST00000514949 RDXP35241 583 aaKnown RBP18.44■□□□□ 0.54
SNX2-213ENST00000514949 SKIV2L2P42285 1042 aaKnown RBP18.44■□□□□ 0.54
SNX2-213ENST00000514949 SLC25A11Q02978 314 aaKnown RBP18.44■□□□□ 0.54
SNX2-213ENST00000514949 TRPC3Q13507 836 aa18.44■□□□□ 0.54
SNX2-213ENST00000514949 FAM133BQ5BKY9 247 aaKnown RBP18.44■□□□□ 0.54
SNX2-213ENST00000514949 CENPUQ71F23 418 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms