RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RBP5P82980 135 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 BFSP1Q12934 665 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 CUL4BQ13620 913 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 VEPH1Q14D04 833 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 SURF1Q15526 300 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 SNRNP35Q16560 246 aaKnown RBP11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 MGAT5BQ3V5L5 792 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 STXBP5Q5T5C0 1151 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 TPRG1Q6ZUI0 275 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 GAREM2Q75VX8 874 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 LIMS2Q7Z4I7 341 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 FRMD5Q7Z6J6 570 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 DNAJB7Q7Z6W7 309 aaPredicted RBP11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 WDR49Q8IV35 697 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 GRAMD1CQ8IYS0 662 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 CSGALNACT2Q8N6G5 542 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 TOP6BLQ8N6T0 577 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 OR5B17Q8NGF7 314 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 RSPRY1Q96DX4 576 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 PKMYT1Q99640 499 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 ACBD6Q9BR61 282 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 SLITRK6Q9H5Y7 841 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 LTB4R2Q9NPC1 389 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 TRPV5Q9NQA5 729 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 HEBP1Q9NRV9 189 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 TMLHEQ9NVH6 421 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 ABI2Q9NYB9 513 aaPredicted RBP11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 ZDHHC9Q9Y397 364 aa11.25□□□□□ -0.61
HMGXB3-205ENST00000514469 PRR23AA6NEV1 266 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 ARNTLO00327 626 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 GABRDO14764 452 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 KLRC4O43908 158 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 HUS1O60921 280 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 LRRN2O75325 713 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 TNNC2P02585 160 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 KRT19P08727 400 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 SLFN14P0C7P3 912 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 PFKFB1P16118 471 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 GABRR2P28476 465 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 WEE1P30291 646 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 VIPR2P41587 438 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 AFMP43652 599 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 CDR1P51861 262 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 TSPY1Q01534 308 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 NFE2Q16621 373 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 INTS6LQ5JSJ4 861 aaKnown RBP11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 OSTM1Q86WC4 334 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 MFSD6LQ8IWD5 586 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 NELFCDQ8IXH7 590 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 C12orf56Q8IXR9 622 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 CEP57L1Q8IYX8 460 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 ADGRF2Q8IZF7 708 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 IRF7Q92985 503 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 E2F7Q96AV8 911 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 CGRRF1Q99675 332 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 TRMT61BQ9BVS5 477 aaKnown RBP11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 BRD9Q9H8M2 597 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 IL21Q9HBE4 155 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 DDX43Q9NXZ2 648 aaKnown RBP11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 CGNQ9P2M7 1197 aaKnown RBP11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 SERTAD1Q9UHV2 236 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 PCDHB5Q9Y5E4 795 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 SNX9Q9Y5X1 595 aa11.24□□□□□ -0.61
HMGXB3-205ENST00000514469 PATJQ8NI35 1801 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 NUP210Q8TEM1 1887 aaPredicted RBP11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 TCHHQ07283 1943 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 HEPACAM2A8MVW5 462 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 CLIC2O15247 247 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 CD72P21854 359 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 CMA1P23946 247 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 ACAT1P24752 427 aaKnown RBP11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 TARSP26639 723 aaKnown RBP11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 CDC25CP30307 473 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 GDI1P31150 447 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 MAGEA9P43362 315 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 CYP2J2P51589 502 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 MYL7Q01449 175 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 CYP24A1Q07973 514 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 FCHO2Q0JRZ9 810 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 MYO1EQ12965 1108 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 PSMD6Q15008 389 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 DUOXA2Q1HG44 320 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 SOWAHAQ2M3V2 549 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 ARHGAP15Q53QZ3 475 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 ZNF852Q6ZMS4 543 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 DPH6Q7L8W6 267 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 HS2ST1Q7LGA3 356 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 ASCL5Q7RTU5 278 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 C1orf210Q8IVY1 113 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 XXYLT1Q8NBI6 393 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 FAM200AQ8TCP9 573 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 KBTBD7Q8WVZ9 684 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 PAGE5Q96GU1 130 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 HPDLQ96IR7 371 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms