RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 LMO2P25791 158 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 NDUFV1P49821 464 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 DLX2Q07687 328 aaPredicted RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 MRPL58Q14197 206 aaKnown RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 BMS1Q14692 1282 aaKnown RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 CLUL1Q15846 466 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 PDE12Q6L8Q7 609 aaKnown RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 RRAGAQ7L523 313 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 CCDC150Q8NCX0 1101 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 OR6B3Q8NGW1 331 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 LMO3Q8TAP4 145 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 SLC39A7Q92504 469 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 TWNKQ96RR1 684 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 VRTNQ9H8Y1 702 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 TMLHEQ9NVH6 421 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 CLDND1Q9NY35 253 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 LMCD1Q9NZU5 365 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 LIMA1Q9UHB6 759 aaKnown RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 CDH22Q9UJ99 828 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 DSEQ9UL01 958 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 COQ4Q9Y3A0 265 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 BACE2Q9Y5Z0 518 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 IRAK3Q9Y616 596 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 SPTBN5Q9NRC6 3674 aaKnown RBP10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 C5orf42Q9H799 3197 aa10.49□□□□□ -0.73
TOPBP1-209ENST00000513818 GOLGA6L19H0YKK7 550 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 H7C4K7 107 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 TGM5O43548 720 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 SOAT2O75908 522 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 OAZ2O95190 189 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 VNN2O95498 520 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 GLUD1P00367 558 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 C7P10643 843 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 WARSP23381 471 aaKnown RBP10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 CLCN4P51793 760 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 SLC39A12Q504Y0 691 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 ZNF394Q53GI3 561 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 WDR44Q5JSH3 913 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 RNF19BQ6ZMZ0 732 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 LIMS2Q7Z4I7 341 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 PPM1KQ8N3J5 372 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 C12orf76Q8N812 135 aaPredicted RBP10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 STKLD1Q8NE28 680 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 SLC22A17Q8WUG5 538 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 TAF4BQ92750 862 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 NT5C1BQ96P26 610 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 SYT15Q9BQS2 421 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 LSM14BQ9BX40 385 aaKnown RBP10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 BCO2Q9BYV7 579 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 RHOBTB2Q9BYZ6 727 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 CRISPLD1Q9H336 500 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 SNX25Q9H3E2 840 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 SIX2Q9NPC8 291 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 MAN1C1Q9NR34 630 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 FNIP2Q9P278 1114 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 STK39Q9UEW8 545 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 SSX2IPQ9Y2D8 614 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 STXBP5LQ9Y2K9 1186 aa10.48□□□□□ -0.73
TOPBP1-209ENST00000513818 ARHGEF37A1IGU5 675 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 MYBPHLA2RUH7 354 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 OR6C75A6NL08 312 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 LGALS16A8MUM7 142 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 A8MXQ7 604 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 H3BQ06 376 aaPredicted RBP10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 GABRDO14764 452 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 TEX33O43247 280 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 RFPL2O75678 378 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 SEC24AO95486 1093 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 CALCAP01258 141 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 PNMA6AP0CW24 399 aaPredicted RBP10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 P4HA1P13674 534 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 PAX3P23760 479 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 PON1P27169 355 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 NDST1P52848 882 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 CREMQ03060 361 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 KCNMA1Q12791 1236 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 CUL2Q13617 745 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 RAB33AQ14088 237 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 EXOC3L4Q17RC7 722 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 MDH1BQ5I0G3 518 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 INTS6LQ5JSJ4 861 aaKnown RBP10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 SLC8B1Q6J4K2 584 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 PHLDB3Q6NSJ2 640 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 PDXDC1Q6P996 788 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 TRIM65Q6PJ69 517 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 GBP6Q6ZN66 633 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 DPH6Q7L8W6 267 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 LRRTM3Q86VH5 581 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 GAS2L3Q86XJ1 694 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 THEM5Q8N1Q8 247 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 TMEM86AQ8N2M4 240 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 EFHBQ8N7U6 833 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 EHBP1Q8NDI1 1231 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 ANKRD20A12PQ8NF67 263 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 PPP2R3CQ969Q6 453 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 MYLPFQ96A32 169 aa10.47□□□□□ -0.73
TOPBP1-209ENST00000513818 KREMEN1Q96MU8 473 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms