RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 PAK2Q13177 524 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 CLUL1Q15846 466 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 CNGA2Q16280 664 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 PTCRAQ6ISU1 281 aaPredicted RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 TMEM270Q6UE05 265 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 SLC35F6Q8N357 371 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 CEP112Q8N8E3 955 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 SPATA18Q8TC71 538 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 TMEM176AQ96HP8 235 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 MIS12Q9H081 205 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 MRPL47Q9HD33 250 aaKnown RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 KANSL3Q9P2N6 904 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 PARP2Q9UGN5 583 aa10.53□□□□□ -0.72
TPM3-221ENST00000513769 BARX2Q9UMQ3 279 aaPredicted RBP10.53□□□□□ -0.72
TPM3-221ENST00000513769 H0YGN5 161 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 INPPL1O15357 1258 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 CTIFO43310 598 aaKnown RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 RECQL4O94761 1208 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 CYP1A2P05177 515 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 TUBBP07437 444 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 VDRP11473 427 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 GNA15P30679 374 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 POLR2BP30876 1174 aaKnown RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 ASPAP45381 313 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 NOP2P46087 812 aaKnown RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 TNNC1P63316 161 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 INCA1Q0VD86 236 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 LPIN1Q14693 890 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 WHAMMP3Q1A5X7 153 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 CLEC16AQ2KHT3 1053 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 ZNF618Q5T7W0 954 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 C9orf57Q5W0N0 161 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 SPOPLQ6IQ16 392 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 SLC24A5Q71RS6 500 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 ANKRD33Q7Z3H0 272 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 LIMS2Q7Z4I7 341 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 PHF13Q86YI8 300 aaPredicted RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 CRYBG2Q8N1P7 616 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 RBBP8NLQ8NC74 664 aaPredicted RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 TMEM35BQ8NCS4 154 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 MNS1Q8NEH6 495 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 SLC35G2Q8TBE7 412 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 RFFLQ8WZ73 363 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 APBB2Q92870 758 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 ZNF560Q96MR9 790 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 ZMAT2Q96NC0 199 aaKnown RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 RPS6KC1Q96S38 1066 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 PCDHB18PQ96TA0 734 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 RNF208Q9H0X6 261 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 PDCL3Q9H2J4 239 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 ELAC1Q9H777 363 aaKnown RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 AGO3Q9H9G7 860 aaKnown RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.73
TPM3-221ENST00000513769 GTF3C4Q9UKN8 822 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 CEP83Q9Y592 693 aa10.52□□□□□ -0.73
TPM3-221ENST00000513769 ARHGEF37A1IGU5 675 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 MACROD2A1Z1Q3 448 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 EFCAB8A8MWE9 144 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 KPNA7A9QM74 516 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 CILPO75339 1184 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 KIF4AO95239 1232 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 MMEP08473 750 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 WEE2P0C1S8 567 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 CCNYL3P0C7X3 344 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 CCL5P13501 91 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 SELPP16109 830 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 AKAP5P24588 427 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 CENPCQ03188 943 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 TAP1Q03518 808 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 ITIH3Q06033 890 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 SV2CQ496J9 727 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 MEI1Q5TIA1 1274 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 LIN9Q5TKA1 542 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 TOP6BLQ8N6T0 577 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 TPCN2Q8NHX9 752 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 OLIG1Q8TAK6 271 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 PRR7Q8TB68 274 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 SH3TC2Q8TF17 1288 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 DPF3Q92784 378 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 UROC1Q96N76 676 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 PPP1R10Q96QC0 940 aaKnown RBP10.51□□□□□ -0.73
TPM3-221ENST00000513769 NT5C1AQ9BXI3 368 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 UNC93B1Q9H1C4 597 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 NXF3Q9H4D5 531 aaKnown RBP10.51□□□□□ -0.73
TPM3-221ENST00000513769 ABCB6Q9NP58 842 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 TRMT13Q9NUP7 481 aaKnown RBP10.51□□□□□ -0.73
TPM3-221ENST00000513769 SEPT11Q9NVA2 429 aaKnown RBP10.51□□□□□ -0.73
TPM3-221ENST00000513769 WDR35Q9P2L0 1181 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
TPM3-221ENST00000513769 MRFAP1Q9Y605 127 aa10.51□□□□□ -0.73
TPM3-221ENST00000513769 A0A0U1RQJ8 604 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 DCDC2CA8MYV0 355 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 MOCS3O95396 460 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 PNMA6AP0CW24 399 aaPredicted RBP10.5□□□□□ -0.73
TPM3-221ENST00000513769 SLC1A1P43005 524 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 NSFP46459 744 aaKnown RBP10.5□□□□□ -0.73
TPM3-221ENST00000513769 TAF6P49848 677 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 RAD23BP54727 409 aa10.5□□□□□ -0.73
TPM3-221ENST00000513769 LILRA4P59901 499 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms