RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
CLDND1-227ENST00000513452 LOC400499M0QZD8 3231 aa11.42□□□□□ -0.58
CLDND1-227ENST00000513452 ASCC3Q8N3C0 2202 aaKnown RBP11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ATXN2Q99700 1313 aaKnown RBP11.41□□□□□ -0.58
CLDND1-227ENST00000513452 SMG1Q96Q15 3661 aaKnown RBP11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ABLIM1O14639 778 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 CAPNS1P04632 268 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ATF6P18850 670 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 GJA4P35212 333 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 NPTX2P47972 431 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 AARSP49588 968 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLDND1-227ENST00000513452 PEX3P56589 373 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 MYBPC2Q14324 1141 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 SLC10A6Q3KNW5 377 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ARMCX5Q6P1M9 558 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 TAS1R3Q7RTX0 852 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 PIP4P1Q86T03 277 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 CPA6Q8N4T0 437 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 TTC16Q8NEE8 873 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 GIPC2Q8TF65 315 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 CD101Q93033 1021 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ZBTB45Q96K62 511 aaPredicted RBP11.41□□□□□ -0.58
CLDND1-227ENST00000513452 TMEM60Q9H2L4 133 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 BHMT2Q9H2M3 363 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ANKFY1Q9P2R3 1169 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 TBX20Q9UMR3 447 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 CYP46A1Q9Y6A2 500 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 KIAA1549LQ6ZVL6 1849 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ASH1LQ9NR48 2969 aaKnown RBP11.41□□□□□ -0.58
CLDND1-227ENST00000513452 ABCA7Q8IZY2 2146 aa11.41□□□□□ -0.58
CLDND1-227ENST00000513452 CITO14578 2027 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 THADAQ6YHU6 1953 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 EIF4E1BA6NMX2 242 aaKnown RBP11.4□□□□□ -0.58
CLDND1-227ENST00000513452 H0Y626 953 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 TRIM16O95361 564 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 CXCL8P10145 99 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 PROZP22891 400 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 RPA1P27694 616 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 LRPAP1P30533 357 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 RDXP35241 583 aaKnown RBP11.4□□□□□ -0.58
CLDND1-227ENST00000513452 GUCY2FP51841 1108 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 SEC13P55735 322 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 FAM193AP78312 1265 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 SCRN1Q12765 414 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 SCAPQ12770 1279 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 SEMA3BQ13214 749 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 NOLC1Q14978 699 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLDND1-227ENST00000513452 PDGFRLQ15198 375 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 MGAT5BQ3V5L5 792 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 MDGA1Q8NFP4 955 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 OR10T2Q8NGX3 314 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 ERMNQ8TAM6 284 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 CNOT6LQ96LI5 555 aaKnown RBP11.4□□□□□ -0.58
CLDND1-227ENST00000513452 BBC3Q96PG8 261 aaPredicted RBP11.4□□□□□ -0.58
CLDND1-227ENST00000513452 ECT2Q9H8V3 914 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 FSCN3Q9NQT6 498 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 TDP1Q9NUW8 608 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 HSFX1Q9UBD0 423 aa11.4□□□□□ -0.58
CLDND1-227ENST00000513452 HELZ2Q9BYK8 2649 aaKnown RBP11.4□□□□□ -0.58
CLDND1-227ENST00000513452 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 FAM221BA6H8Z2 402 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 PPEF2O14830 753 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 CFIP05156 583 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 TYMPP19971 482 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 MCM7P33993 719 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 PTGER3P43115 390 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 TUFMP49411 452 aaKnown RBP11.39□□□□□ -0.59
CLDND1-227ENST00000513452 ATXN3P54252 364 aaPredicted RBP11.39□□□□□ -0.59
CLDND1-227ENST00000513452 NLRP12P59046 1061 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 DMP1Q13316 513 aaPredicted RBP11.39□□□□□ -0.59
CLDND1-227ENST00000513452 MTF1Q14872 753 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 SLC39A12Q504Y0 691 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 C2orf27AQ580R0 203 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 TXNDC8Q6A555 127 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 LPCAT2Q7L5N7 544 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 RAB44Q7Z6P3 723 aaPredicted RBP11.39□□□□□ -0.59
CLDND1-227ENST00000513452 TMEM150AQ86TG1 271 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 RASSF3Q86WH2 238 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 SYT12Q8IV01 421 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 TMEFF1Q8IYR6 380 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 HDDC3Q8N4P3 179 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 RLN3Q8WXF3 142 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 GTPBP2Q9BX10 602 aaKnown RBP11.39□□□□□ -0.59
CLDND1-227ENST00000513452 TMEM134Q9H6X4 195 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 KMT5AQ9NQR1 393 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 TMEM74BQ9NUR3 256 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 ARHGAP28Q9P2N2 729 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
CLDND1-227ENST00000513452 MBD1Q9UIS9 605 aaPredicted RBP11.39□□□□□ -0.59
CLDND1-227ENST00000513452 ZMYM5Q9UJ78 669 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 WNT6Q9Y6F9 365 aa11.39□□□□□ -0.59
CLDND1-227ENST00000513452 MYO16Q9Y6X6 1858 aa11.38□□□□□ -0.59
CLDND1-227ENST00000513452 TSC2P49815 1807 aa11.38□□□□□ -0.59
CLDND1-227ENST00000513452 UPK3BL1B0FP48 263 aa11.38□□□□□ -0.59
CLDND1-227ENST00000513452 BTBD18B2RXH4 712 aa11.38□□□□□ -0.59
CLDND1-227ENST00000513452 UPK3BL2E5RIL1 263 aa11.38□□□□□ -0.59
CLDND1-227ENST00000513452 TNFRSF10BO14763 440 aa11.38□□□□□ -0.59
CLDND1-227ENST00000513452 MAP3K13O43283 966 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms