RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ARHGEF39Q8N4T4 335 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 PJA1Q8NG27 643 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 PIBF1Q8WXW3 757 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 GLG1Q92896 1179 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ZNF668Q96K58 619 aaPredicted RBP5.47□□□□□ -1.53
HTT-211ENST00000513326 TTC14Q96N46 770 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ZNF558Q96NG5 402 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 TMEM117Q9H0C3 514 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ZBP1Q9H171 429 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ATP6V0A4Q9HBG4 840 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ARHGEF3Q9NR81 526 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 RGS18Q9NS28 235 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 GFOD1Q9NXC2 390 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ERAP1Q9NZ08 941 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 SPG21Q9NZD8 308 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 WNT16Q9UBV4 365 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 MAD2L2Q9UI95 211 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 EMC9Q9Y3B6 208 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 SIT1Q9Y3P8 196 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 PCDHA2Q9Y5H9 948 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 KDM3AQ9Y4C1 1321 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ASPMQ8IZT6 3477 aa5.46□□□□□ -1.53
HTT-211ENST00000513326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.46□□□□□ -1.54
HTT-211ENST00000513326 DENND3A2RUS2 1198 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 RPS6KA5O75582 802 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 RFPL2O75678 378 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 CLSTN1O94985 981 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 IGHA1P01876 353 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 ITGB5P18084 799 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 CD72P21854 359 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 FGFR4P22455 802 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 PMLP29590 882 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 HOXC13P31276 330 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 BCAR1P56945 870 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 FAM189BP81408 668 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 CSTF1Q05048 431 aaKnown RBP5.46□□□□□ -1.54
HTT-211ENST00000513326 HSP90AA2PQ14568 343 aaPredicted RBP5.46□□□□□ -1.54
HTT-211ENST00000513326 PTPN14Q15678 1187 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 LETM2Q2VYF4 491 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 LONRF3Q496Y0 759 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 ZC3H14Q6PJT7 736 aaKnown RBP5.46□□□□□ -1.54
HTT-211ENST00000513326 MTHFD1LQ6UB35 978 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 MFSD6Q6ZSS7 791 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 TMC3Q7Z5M5 1100 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 CABP7Q86V35 215 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 DGKHQ86XP1 1220 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 KIAA0319LQ8IZA0 1049 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 LRRC43Q8N309 656 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 RNF169Q8NCN4 708 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 ADCY4Q8NFM4 1077 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 BRF1Q92994 677 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 RTKNQ9BST9 563 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 DSCC1Q9BVC3 393 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 GPR62Q9BZJ7 368 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 MAF1Q9H063 256 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 TRIT1Q9H3H1 467 aaKnown RBP5.46□□□□□ -1.54
HTT-211ENST00000513326 KAT14Q9H8E8 782 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 LRRC4CQ9HCJ2 640 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 CHST7Q9NS84 486 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 GPATCH2Q9NW75 528 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 SPATA6Q9NWH7 488 aaPredicted RBP5.46□□□□□ -1.54
HTT-211ENST00000513326 TMEM161AQ9NX61 479 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 PUF60Q9UHX1 559 aaKnown RBP5.46□□□□□ -1.54
HTT-211ENST00000513326 AKT3Q9Y243 479 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 SF3B6Q9Y3B4 125 aaKnown RBP5.46□□□□□ -1.54
HTT-211ENST00000513326 SQORQ9Y6N5 450 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 MIA3Q5JRA6 1907 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 SALL3Q9BXA9 1300 aa5.46□□□□□ -1.54
HTT-211ENST00000513326 EVPLQ92817 2033 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 MYH15Q9Y2K3 1946 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 SMIM35A0A1B0GVV1 85 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 SHISA7A6NL88 538 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 KLRF2D3W0D1 207 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 MEIS2O14770 477 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 SLC30A4O14863 429 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 CYP26A1O43174 497 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 DYRK3O43781 588 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 GPR32O75388 356 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 CDC45O75419 566 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 CSDE1O75534 798 aaKnown RBP5.45□□□□□ -1.54
HTT-211ENST00000513326 PRAMEF1O95521 474 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 VTNP04004 478 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 CEACAM5P06731 702 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 CNPP09543 421 aaKnown RBP5.45□□□□□ -1.54
HTT-211ENST00000513326 FAM153BP0C7A2 387 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 C1QTNF9P0C862 333 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 SRFP11831 508 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 CLCN4P51793 760 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 PPP2R2AP63151 447 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 KRT17Q04695 432 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 SQSTM1Q13501 440 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 HTR4Q13639 388 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 NKPD1Q17RQ9 610 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 CLEC16AQ2KHT3 1053 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 N4BP2L1Q5TBK1 243 aaPredicted RBP5.45□□□□□ -1.54
HTT-211ENST00000513326 EGFLAMQ63HQ2 1017 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 DCLRE1AQ6PJP8 1040 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 CYB5R4Q7L1T6 521 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 ZNF227Q86WZ6 799 aa5.45□□□□□ -1.54
HTT-211ENST00000513326 ECHDC2Q86YB7 292 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms