RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ADGRF2Q8IZF7 708 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 EHBP1Q8NDI1 1231 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 LMO3Q8TAP4 145 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 PPP2R3CQ969Q6 453 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 FAM81BQ96LP2 452 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 ERGIC2Q96RQ1 377 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 MMS19Q96T76 1030 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 GAS2L1Q99501 681 aaPredicted RBP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 CRACR2AQ9BSW2 395 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 BCO2Q9BYV7 579 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 INTS2Q9H0H0 1204 aaKnown RBP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 RBSNQ9H1K0 784 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 CYP3A43Q9HB55 503 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 MRPL17Q9NRX2 175 aaKnown RBP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 LMCD1Q9NZU5 365 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 NXF1Q9UBU9 619 aaKnown RBP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 APEX2Q9UBZ4 518 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 L1RE1Q9UN81 338 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 HELZP42694 1942 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 DOCK8Q8NF50 2099 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 C2CD2LO14523 706 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 GABRDO14764 452 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 CBFA2T2O43439 604 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 LRRN2O75325 713 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 OAZ2O95190 189 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 SLC9A1P19634 815 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 WARSP23381 471 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 DNAJB1P25685 340 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 PON1P27169 355 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 CA8P35219 290 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 LHX1P48742 406 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 UBASH3AP57075 661 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 ERVFC1P60507 584 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 YWHAEP62258 255 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 GCNT1Q02742 428 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 UBXN1Q04323 297 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 KCNMA1Q12791 1236 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 CUL2Q13617 745 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 GRIN2CQ14957 1233 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 SOWAHAQ2M3V2 549 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 KIAA0319Q5VV43 1072 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 PLPP4Q5VZY2 271 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 WSCD1Q658N2 575 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 ENOSF1Q7L5Y1 443 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 TAS1R1Q7RTX1 841 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 THEM5Q8N1Q8 247 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 PPM1KQ8N3J5 372 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 PDCL2Q8N4E4 241 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 TTC39CQ8N584 583 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 LNX1Q8TBB1 728 aaPredicted RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 KBTBD7Q8WVZ9 684 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 RIN2Q8WYP3 895 aaPredicted RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 MRPL38Q96DV4 380 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 B3GALT6Q96L58 329 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 PRDM12Q9H4Q4 367 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 SMYD3Q9H7B4 428 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 APOBEC3GQ9HC16 384 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 PLCB1Q9NQ66 1216 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 FNIP2Q9P278 1114 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 MTRRQ9UBK8 725 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 POLIQ9UNA4 740 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 DAAM1Q9Y4D1 1078 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 TIMM13Q9Y5L4 95 aaPredicted RBP8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 BACE2Q9Y5Z0 518 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 NOTCH4Q99466 2003 aa8.11□□□□□ -1.11
HMGXB3-204ENST00000513318 SZT2Q5T011 3432 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 A0A1W2PQC6 194 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 FSD2A1L4K1 749 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 C2orf71A6NGG8 1288 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 OR6C75A6NL08 312 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 RFXAPO00287 272 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 LILRB3O75022 631 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 CSPG5O95196 566 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 ADH1AP07327 375 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 TRIM21P19474 475 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 POU3F3P20264 500 aaPredicted RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 PCSK1P29120 753 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 IRS1P35568 1242 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 RAP1GAPP47736 663 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 NDUFV1P49821 464 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 PTPN5P54829 565 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 INCA1Q0VD86 236 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 LRMPQ12912 555 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 NR1I3Q14994 352 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 SYCP1Q15431 976 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 UVSSAQ2YD98 709 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 CTXN3Q4LDR2 81 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 SLC8B1Q6J4K2 584 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 SARM1Q6SZW1 724 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 PRSS55Q6UWB4 352 aaPredicted RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 UNC93AQ86WB7 457 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 ARHGEF19Q8IW93 802 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 MRPL43Q8N983 215 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 NEK11Q8NG66 645 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 OR6B3Q8NGW1 331 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 MICAL1Q8TDZ2 1067 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms