RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ADAM32Q8TC27 787 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 SLC32A1Q9H598 525 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 ZSWIM6Q9HCJ5 1215 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 CACNA2D2Q9NY47 1150 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 ASXL3Q9C0F0 2248 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 PLXNB3Q9ULL4 1909 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 K7EQS6 105 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 CTDNEP1O95476 244 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 FGF19O95750 216 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 MCF2P10911 925 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 CHRM1P11229 460 aaPredicted RBP12.18□□□□□ -0.46
RNF4-218ENST00000513284 HMGA1P17096 107 aaKnown RBP12.18□□□□□ -0.46
RNF4-218ENST00000513284 NMT1P30419 496 aaKnown RBP12.18□□□□□ -0.46
RNF4-218ENST00000513284 LRPAP1P30533 357 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 PTGER3P43115 390 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 SCRN1Q12765 414 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 MYBPC2Q14324 1141 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 TMEM92Q6UXU6 159 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 DAW1Q8N136 415 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 MAB21L3Q8N8X9 362 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 OR10T2Q8NGX3 314 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 HNRNPLLQ8WVV9 542 aaKnown RBP12.18□□□□□ -0.46
RNF4-218ENST00000513284 RLN3Q8WXF3 142 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 OXCT2Q9BYC2 517 aaPredicted RBP12.18□□□□□ -0.46
RNF4-218ENST00000513284 HAPLN2Q9GZV7 340 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 TMEM134Q9H6X4 195 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 ECT2Q9H8V3 914 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 HSFX1Q9UBD0 423 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 CYP46A1Q9Y6A2 500 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 KIAA1549LQ6ZVL6 1849 aa12.18□□□□□ -0.46
RNF4-218ENST00000513284 PI4KAP42356 2102 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 KALRNO60229 2985 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 CITO14578 2027 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 TNRC6BQ9UPQ9 1833 aaKnown RBP12.17□□□□□ -0.46
RNF4-218ENST00000513284 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 H0Y626 953 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 PPEF2O14830 753 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 CDKL5O76039 1030 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 TRIM16O95361 564 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 CD59P13987 128 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 FDPSP14324 419 aaKnown RBP12.17□□□□□ -0.46
RNF4-218ENST00000513284 RPA1P27694 616 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 NPTX2P47972 431 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 GUCY2FP51841 1108 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 LMAN2Q12907 356 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 TXNDC8Q6A555 127 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 ANO7Q6IWH7 933 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 ITIH5Q86UX2 942 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 C11orf74Q86VG3 221 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 LRRTM3Q86VH5 581 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 TMEFF1Q8IYR6 380 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 MDGA1Q8NFP4 955 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 TSTD1Q8NFU3 115 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 USP33Q8TEY7 942 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 CD101Q93033 1021 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 IFT74Q96LB3 600 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 CNOT6LQ96LI5 555 aaKnown RBP12.17□□□□□ -0.46
RNF4-218ENST00000513284 CAMK1GQ96NX5 476 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 TDP1Q9NUW8 608 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 DENND4CQ5VZ89 1909 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 ADAMTS9Q9P2N4 1935 aa12.17□□□□□ -0.46
RNF4-218ENST00000513284 TNFRSF10BO14763 440 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 NEMFO60524 1076 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 CDC25CP30307 473 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 P2RY2P41231 377 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 PEX3P56589 373 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 NLRP12P59046 1061 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 AMPD2Q01433 879 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 PSMD2Q13200 908 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 OVOS1Q6IE37 1185 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 MPZL3Q6UWV2 235 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
RNF4-218ENST00000513284 ARMCX6Q7L4S7 300 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 APBB1IPQ7Z5R6 666 aaPredicted RBP12.16□□□□□ -0.46
RNF4-218ENST00000513284 SYT12Q8IV01 421 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 SFTPA1Q8IWL2 248 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 PNPLA1Q8N8W4 532 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 OR2I1PQ8NGU4 316 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 KIFAP3Q92845 792 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 LRIG1Q96JA1 1093 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 TCHPQ9BT92 498 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 NUSAP1Q9BXS6 441 aaKnown RBP12.16□□□□□ -0.46
RNF4-218ENST00000513284 MRPL4Q9BYD3 311 aaKnown RBP12.16□□□□□ -0.46
RNF4-218ENST00000513284 LINC00597Q9H2U6 94 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 ARHGAP28Q9P2N2 729 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 PILRBQ9UKJ0 227 aa12.16□□□□□ -0.46
RNF4-218ENST00000513284 TTC26A0AVF1 554 aa12.15□□□□□ -0.46
RNF4-218ENST00000513284 CCDC169A6NNP5 214 aa12.15□□□□□ -0.46
RNF4-218ENST00000513284 BTBD18B2RXH4 712 aa12.15□□□□□ -0.46
RNF4-218ENST00000513284 HARSP12081 509 aaKnown RBP12.15□□□□□ -0.46
RNF4-218ENST00000513284 TYMPP19971 482 aa12.15□□□□□ -0.46
RNF4-218ENST00000513284 ITPKAP23677 461 aa12.15□□□□□ -0.46
RNF4-218ENST00000513284 TUFMP49411 452 aaKnown RBP12.15□□□□□ -0.46
RNF4-218ENST00000513284 LILRA4P59901 499 aa12.15□□□□□ -0.46
RNF4-218ENST00000513284 PDGFRLQ15198 375 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms