RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 PAX7P23759 505 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 LSP1P33241 339 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 PNPLA4P41247 253 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 SLC15A2Q16348 729 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 ZCWPW1Q9H0M4 648 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 ALDH8A1Q9H2A2 487 aaPredicted RBP16.81■□□□□ 0.28
TRIO-221ENST00000513206 DLGAP2Q9P1A6 1054 aa16.81■□□□□ 0.28
TRIO-221ENST00000513206 C5orf58C9J3I9 102 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 CD274Q9NZQ7 290 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 H7C4K7 107 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 TPP2P29144 1249 aaPredicted RBP16.8■□□□□ 0.28
TRIO-221ENST00000513206 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
TRIO-221ENST00000513206 FOXN1O15353 648 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 ATG4CQ96DT6 458 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 ITGB1BP2Q9UKP3 347 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 MYMKA6NI61 221 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 SUPT3HB4E1H0 165 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 SLC18A3Q16572 532 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 TSGA10IPQ3SY00 556 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 MTHFD1LQ6UB35 978 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 C11orf96Q7Z7L8 435 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 ERO1BQ86YB8 467 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 RRAGCQ9HB90 399 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 ALDH1A2O94788 518 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 RASA1P20936 1047 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 ZRANB3Q5FWF4 1079 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 GLRA4Q5JXX5 417 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 GPAT2Q6NUI2 795 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 LONP2Q86WA8 852 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.8■□□□□ 0.28
TRIO-221ENST00000513206 TBX20Q9UMR3 447 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 BACE1P56817 501 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 SNRPFP62306 86 aaKnown RBP16.8■□□□□ 0.28
TRIO-221ENST00000513206 EFHC1Q5JVL4 640 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 STOX1Q6ZVD7 989 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 TRAPPC11Q7Z392 1133 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 TMEM161AQ9NX61 479 aa16.8■□□□□ 0.28
TRIO-221ENST00000513206 SERPINB4P48594 390 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 IRAK1P51617 712 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 MFSD4BQ5TF39 518 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 CYB5D1Q6P9G0 228 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 C10orf88Q9H8K7 445 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 PTPRMP28827 1452 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 ANGPT2O15123 496 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 VTNP04004 478 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 IPMKQ8NFU5 416 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 PRG3Q9Y2Y8 225 aaPredicted RBP16.79■□□□□ 0.28
TRIO-221ENST00000513206 NTSR2O95665 410 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 HLA-DRAP01903 254 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 GTF2H1P32780 548 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 TEDDM1Q5T9Z0 273 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 SLC25A41Q8N5S1 370 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 JMJD4Q9H9V9 463 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 SNX5Q9Y5X3 404 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 UCHL3P15374 230 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 MDH1P40925 334 aaKnown RBP16.79■□□□□ 0.28
TRIO-221ENST00000513206 CINPQ9BW66 212 aaPredicted RBP16.79■□□□□ 0.28
TRIO-221ENST00000513206 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 MROH8Q9H579 483 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 WARS2Q9UGM6 360 aaKnown RBP16.79■□□□□ 0.28
TRIO-221ENST00000513206 CATSPER3Q86XQ3 398 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 CASP10Q92851 521 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 ARL8AQ96BM9 186 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 ANKEF1Q9NU02 776 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 VIRMAQ69YN4 1812 aaKnown RBP16.79■□□□□ 0.28
TRIO-221ENST00000513206 ANO9A1A5B4 782 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 FOXP2O15409 715 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
TRIO-221ENST00000513206 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 CHSY1Q86X52 802 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 CROCCQ5TZA2 2017 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 FAM47DPA6NHR8 397 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 ATN1P54259 1190 aaPredicted RBP16.79■□□□□ 0.28
TRIO-221ENST00000513206 PDK1Q15118 436 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRIO-221ENST00000513206 RFWD2Q8NHY2 731 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 DACH2Q96NX9 599 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 TARS2Q9BW92 718 aaKnown RBP16.79■□□□□ 0.28
TRIO-221ENST00000513206 CNGB3Q9NQW8 809 aa16.79■□□□□ 0.28
TRIO-221ENST00000513206 CSF1RP07333 972 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 MAPRE2Q15555 327 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 METTL5Q9NRN9 209 aaKnown RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 PCDHB2Q9Y5E7 798 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 ESYT3A0FGR9 886 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 PGK2P07205 417 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 SLC11A2P49281 568 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 TFB1MQ8WVM0 346 aaKnown RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 CPB2Q96IY4 423 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 TAF6P49848 677 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 DAB2P98082 770 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 PLEKHH3Q7Z736 793 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 DDX28Q9NUL7 540 aaKnown RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 FBXO28Q9NVF7 368 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 UVRAGQ9P2Y5 699 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 RPA1P27694 616 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 ABCE1P61221 599 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms