RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 SMYD3Q9H7B4 428 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 TMEM59LQ9UK28 342 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 HES2Q9Y543 173 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 TRIM17Q9Y577 477 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 SNX9Q9Y5X1 595 aa13.16□□□□□ -0.3
RACK1-229ENST00000513027 O00370 1275 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 DDX3YO15523 660 aaKnown RBP13.15□□□□□ -0.3
RACK1-229ENST00000513027 PSTPIP1O43586 416 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 PROSCO94903 275 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
RACK1-229ENST00000513027 DESP17661 470 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 COMTP21964 271 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 WARSP23381 471 aaKnown RBP13.15□□□□□ -0.3
RACK1-229ENST00000513027 CXCR5P32302 372 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 CDH8P55286 799 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 LPIN1Q14693 890 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 ZNF394Q53GI3 561 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 ZDHHC17Q8IUH5 632 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 NIPA2Q8N8Q9 360 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 LRRN4CLQ8ND94 238 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 TFAP2BQ92481 460 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 C18orf8Q96DM3 657 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 C11orf70Q9BRQ4 267 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 PARD6BQ9BYG5 372 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 ELOVL4Q9GZR5 314 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 SLITRK6Q9H5Y7 841 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 HESX1Q9UBX0 185 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 TUBGCP4Q9UGJ1 667 aa13.15□□□□□ -0.3
RACK1-229ENST00000513027 TMEM191CA6NGB0 347 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 SIGLEC16A6NMB1 481 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 PDE2AO00408 941 aaPredicted RBP13.14□□□□□ -0.31
RACK1-229ENST00000513027 CTSHP09668 335 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 CKBP12277 381 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 SCNN1AP37088 669 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 LHX1P48742 406 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 PEX5P50542 639 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 CDK7P50613 346 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 LILRA4P59901 499 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 GRIK3Q13003 919 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 DNAJC24Q6P3W2 148 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 TMCO3Q6UWJ1 677 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 MMS22LQ6ZRQ5 1243 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 MAATS1Q7Z4T9 603 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 RHOT1Q8IXI2 618 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 C1orf131Q8NDD1 294 aaKnown RBP13.14□□□□□ -0.31
RACK1-229ENST00000513027 CCDC26Q8TAB7 109 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 WNT8BQ93098 351 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 C18orf25Q96B23 403 aaPredicted RBP13.14□□□□□ -0.31
RACK1-229ENST00000513027 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
RACK1-229ENST00000513027 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 SNX25Q9H3E2 840 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 ANKZF1Q9H8Y5 726 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 RSAD1Q9HA92 442 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 ARFGAP3Q9NP61 516 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 PAK6Q9NQU5 681 aaPredicted RBP13.14□□□□□ -0.31
RACK1-229ENST00000513027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.14□□□□□ -0.31
RACK1-229ENST00000513027 KANSL3Q9P2N6 904 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.14□□□□□ -0.311e-323■□□□□ 11
RACK1-229ENST00000513027 MTUS1Q9ULD2 1270 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 PTPN22Q9Y2R2 807 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 PTCH2Q9Y6C5 1203 aa13.14□□□□□ -0.31
RACK1-229ENST00000513027 V9GYY5 206 aaPredicted RBP13.14□□□□□ -0.31
RACK1-229ENST00000513027 TCRBV5S1A1TA0A578 114 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 PTGESO14684 152 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 MICAL2O94851 1124 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 GHRP10912 638 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 TNFRSF8P28908 595 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 CD52P31358 61 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 GNL1P36915 607 aaPredicted RBP13.13□□□□□ -0.31
RACK1-229ENST00000513027 GPD2P43304 727 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 SLC8A3P57103 927 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 NAA30Q147X3 362 aaPredicted RBP13.13□□□□□ -0.31
RACK1-229ENST00000513027 SOWAHAQ2M3V2 549 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 PPP1R15BQ5SWA1 713 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 ZNF618Q5T7W0 954 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 C8orf74Q6P047 294 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 DCUN1D2Q6PH85 259 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 SLC24A5Q71RS6 500 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 ARCQ7LC44 396 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 DNAAF5Q86Y56 855 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 PASD1Q8IV76 773 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 WDTC1Q8N5D0 677 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 NOA1Q8NC60 698 aaKnown RBP13.13□□□□□ -0.31
RACK1-229ENST00000513027 OR6B3Q8NGW1 331 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 PPP1R13LQ8WUF5 828 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 APBB2Q92870 758 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 RNPC3Q96LT9 517 aaKnown RBP13.13□□□□□ -0.31
RACK1-229ENST00000513027 SYNCQ9H7C4 482 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 AGO3Q9H9G7 860 aaKnown RBP13.13□□□□□ -0.31
RACK1-229ENST00000513027 RGS18Q9NS28 235 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 HOMER3Q9NSC5 361 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
RACK1-229ENST00000513027 DSEQ9UL01 958 aa13.13□□□□□ -0.31
RACK1-229ENST00000513027 PACSIN2Q9UNF0 486 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms