RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 KCNMB3Q9NPA1 279 aa13.53□□□□□ -0.24
SDHA-215ENST00000512962 DDX25Q9UHL0 483 aaKnown RBP13.53□□□□□ -0.24
SDHA-215ENST00000512962 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
SDHA-215ENST00000512962 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.25
SDHA-215ENST00000512962 ASAP2O43150 1006 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 EXTL3O43909 919 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 PRKCBP05771 671 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 PTPN2P17706 415 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 PSMC3P17980 439 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 FGD1P98174 961 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 MRPL58Q14197 206 aaKnown RBP13.52□□□□□ -0.25
SDHA-215ENST00000512962 PPP2R5DQ14738 602 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 Q6ZUG5 572 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 CEP68Q76N32 757 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 CCDC148Q8NFR7 591 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 TCP11Q8WWU5 503 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 GATA6Q92908 595 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 LRRC3BQ96PB8 259 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.25
SDHA-215ENST00000512962 CRISPLD1Q9H336 500 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 PDZD7Q9H5P4 517 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 RUBCNLQ9H714 662 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 GPRC5CQ9NQ84 441 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 TRPV5Q9NQA5 729 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 CEP72Q9P209 647 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 DMXL2Q8TDJ6 3036 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 LOC400499M0QZD8 3231 aa13.52□□□□□ -0.25
SDHA-215ENST00000512962 DSPP15924 2871 aaKnown RBP13.51□□□□□ -0.25
SDHA-215ENST00000512962 SETXQ7Z333 2677 aaKnown RBP13.51□□□□□ -0.25
SDHA-215ENST00000512962 NUP205Q92621 2012 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 TBX3O15119 743 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 DTNBO60941 627 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 ABLIM3O94929 683 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 GRNP28799 593 aaKnown RBP13.51□□□□□ -0.25
SDHA-215ENST00000512962 CNR2P34972 360 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 RAP1GAPP47736 663 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 CLCNKBP51801 687 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 NLRP5P59047 1200 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 TYRO3Q06418 890 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 RING1Q06587 406 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 SOX4Q06945 474 aaPredicted RBP13.51□□□□□ -0.25
SDHA-215ENST00000512962 TRIP4Q15650 581 aaPredicted RBP13.51□□□□□ -0.25
SDHA-215ENST00000512962 STXBP5Q5T5C0 1151 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 EEF1DP3Q658K8 133 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 WDR5BQ86VZ2 330 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 SKAP1Q86WV1 359 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 C12orf50Q8NA57 414 aaPredicted RBP13.51□□□□□ -0.25
SDHA-215ENST00000512962 SMARCD2Q92925 531 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 ZFYVE19Q96K21 471 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 PCDHA4Q9UN74 947 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 DYRK1BQ9Y463 629 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 INSL5Q9Y5Q6 135 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 BACE2Q9Y5Z0 518 aa13.51□□□□□ -0.25
SDHA-215ENST00000512962 HEPACAM2A8MVW5 462 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 LRG1P02750 347 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 THP07101 528 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 TCF3P15923 654 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 POU5F1BQ06416 359 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 ZNF252P-AS1Q0IIN9 211 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 CCINQ13939 588 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 PCBP1Q15365 356 aaKnown RBP eCLIP13.5□□□□□ -0.25
SDHA-215ENST00000512962 TEAD2Q15562 447 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 NCAPH2Q6IBW4 605 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 MOXD1Q6UVY6 613 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 HACE1Q8IYU2 909 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 ZSCAN18Q8TBC5 510 aaPredicted RBP13.5□□□□□ -0.25
SDHA-215ENST00000512962 NFKBIZQ9BYH8 718 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 POLR3FQ9H1D9 316 aaPredicted RBP13.5□□□□□ -0.25
SDHA-215ENST00000512962 SLKQ9H2G2 1235 aaPredicted RBP13.5□□□□□ -0.25
SDHA-215ENST00000512962 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 KCNMB2Q9Y691 235 aa13.5□□□□□ -0.25
SDHA-215ENST00000512962 GCN1Q92616 2671 aaKnown RBP13.5□□□□□ -0.25
SDHA-215ENST00000512962 SPECC1L-ADORA2AF8WAN1 911 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 TMEM189-UBE2V1I3L0A0 370 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 EIF1AYO14602 144 aaKnown RBP13.49□□□□□ -0.25
SDHA-215ENST00000512962 ZNF263O14978 683 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 B3GAT3O94766 335 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 SLITRK3O94933 977 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 F11P03951 625 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 IFNAR1P17181 557 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 MPLP40238 635 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 NOVA1P51513 510 aaKnown RBP13.49□□□□□ -0.25
SDHA-215ENST00000512962 ARPP19P56211 112 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
SDHA-215ENST00000512962 TFDP1Q14186 410 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 MXD4Q14582 209 aaPredicted RBP13.49□□□□□ -0.25
SDHA-215ENST00000512962 PON2Q15165 354 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 EPHA7Q15375 998 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 SLC8B1Q6J4K2 584 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 MFSD6LQ8IWD5 586 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 BLIDQ8IZY5 108 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 ZNF461Q8TAF7 563 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 SHKBP1Q8TBC3 707 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 GAB3Q8WWW8 586 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 BSNDQ8WZ55 320 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 PPP1R10Q96QC0 940 aaKnown RBP13.49□□□□□ -0.25
SDHA-215ENST00000512962 CYP4F11Q9HBI6 524 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 GTSE1Q9NYZ3 720 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms