RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.15	□□□□□ -1.75
CAST-238	ENST00000512620	KDM5D	Q9BY66	1539 aa		4.15	□□□□□ -1.75
CAST-238	ENST00000512620	EIF4G3	O43432	1585 aa	Known RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	IQGAP2	Q13576	1575 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	CCDC144A	A2RUR9	1427 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	NLRP1	Q9C000	1473 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620		A0A087WV62	115 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	GOLGA6L3	A6NEY3	463 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	TEX33	O43247	280 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	TLR5	O60602	858 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	AGFG2	O95081	481 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	TPM2	P07951	284 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	GNAI3	P08754	354 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	SNRPA1	P09661	255 aa	Known RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	PARP1	P09874	1014 aa	Known RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	MTHFD1	P11586	935 aa	Known RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	XRCC6	P12956	609 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	HSD3B1	P14060	373 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	TSHR	P16473	764 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	MSX2	P35548	267 aa	Predicted RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	IL6ST	P40189	918 aa	Predicted RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	PTTG1IP	P53801	180 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	CLRN1	P58418	232 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	RPS16	P62249	146 aa	Known RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	GNAI1	P63096	354 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	GRM7	Q14831	915 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	STARD3	Q14849	445 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	ELAVL1	Q15717	326 aa	Known RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	ATP2B3	Q16720	1220 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	CCDC38	Q502W7	563 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	CRB2	Q5IJ48	1285 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	SEM1	Q6ZVN7	128 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	MED25	Q71SY5	747 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	FRMD5	Q7Z6J6	570 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	SYTL1	Q8IYJ3	562 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	MPP5	Q8N3R9	675 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	TMIE	Q8NEW7	156 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	TBC1D15	Q8TC07	691 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	MAML1	Q92585	1016 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	TMEM41A	Q96HV5	264 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	SENP7	Q9BQF6	1050 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.14	□□□□□ -1.75
CAST-238	ENST00000512620	SH3BP1	Q9Y3L3	701 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	PAXBP1	Q9Y5B6	917 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	PCDHGB2	Q9Y5G2	931 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	CDC42BPA	Q5VT25	1732 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	KIAA0586	Q9BVV6	1533 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	PLXNC1	O60486	1568 aa		4.14	□□□□□ -1.75
CAST-238	ENST00000512620	RAPGEF6	Q8TEU7	1601 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	CAMSAP2	Q08AD1	1489 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	PRDM15	P57071	1507 aa	Predicted RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	TBKBP1	A7MCY6	615 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	PRR5-ARHGAP8	B1AHC4	643 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620		M0QYG6	137 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	BTN3A1	O00481	513 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	APOL1	O14791	398 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	LAMTOR5	O43504	91 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	FOXD2	O60548	495 aa	Predicted RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	VPS4B	O75351	444 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	SKAP2	O75563	359 aa	Predicted RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	FGF18	O76093	207 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	HAUS5	O94927	633 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	UNC5C	O95185	931 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	POMC	P01189	267 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	GNAT2	P19087	354 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	EN2	P19622	333 aa	Predicted RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	ZNF135	P52742	658 aa	Predicted RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	CALD1	Q05682	793 aa	Known RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	SLC13A2	Q13183	592 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	GRM1	Q13255	1194 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	PMS2P11	Q13670	270 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	UBXN2B	Q14CS0	331 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	BMT2	Q1RMZ1	405 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	DACT2	Q5SW24	774 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	WDR78	Q5VTH9	848 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	LDHAL6A	Q6ZMR3	332 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	MMS22L	Q6ZRQ5	1243 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	LIMS2	Q7Z4I7	341 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	PLEKHH3	Q7Z736	793 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	TICAM2	Q86XR7	235 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	MYCT1	Q8N699	235 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	ZNF527	Q8NB42	609 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	SLC17A8	Q8NDX2	589 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	NSUN7	Q8NE18	718 aa	Known RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	IL17RD	Q8NFM7	739 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	MSLNL	Q96KJ4	702 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	TLR10	Q9BXR5	811 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	TRIM54	Q9BYV2	358 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	IMPG2	Q9BZV3	1241 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	AS3MT	Q9HBK9	375 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	SERHL	Q9NQF3	203 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	PLA2G3	Q9NZ20	509 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	COL20A1	Q9P218	1284 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	AFF4	Q9UHB7	1163 aa	Known RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	MAPK8IP3	Q9UPT6	1336 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.13	□□□□□ -1.75
CAST-238	ENST00000512620	ADAMTS20	P59510	1910 aa		4.13	□□□□□ -1.75
CAST-238	ENST00000512620	OTOL1	A6NHN0	477 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms