RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 HAUS5O94927 633 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 FTLP02792 175 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 POTEIP0CG38 1075 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 MYL4P12829 197 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 JAK1P23458 1154 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SERPINB10P48595 397 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SLC7A5Q01650 507 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 ORC2Q13416 577 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 DDX39BQ13838 428 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 EZH2Q15910 746 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 P3H1Q32P28 736 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 AP1ARQ63HQ0 302 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 UGT3A1Q6NUS8 523 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 POTEGQ6S5H5 508 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 POTEEQ6S8J3 1075 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 PRR23CQ6ZRP0 262 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 ANO5Q75V66 913 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 KRT35Q92764 455 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SMAD5Q99717 465 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 ELAC2Q9BQ52 826 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 EIF2AK1Q9BQI3 630 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 ERAP1Q9NZ08 941 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 DCTN4Q9UJW0 460 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 FAM50BQ9Y247 325 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 POLR1DQ9Y2S0 133 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 CCDC85CA6NKD9 419 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SNTNA6NMZ2 147 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 ZC3H11AO75152 810 aaKnown RBP eCLIP6.03□□□□□ -1.44
USP38-203ENST00000511739 DGAT1O75907 488 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 DRAP1Q14919 205 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 ADGRF4Q8IZF3 695 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 CLEC4FQ8N1N0 589 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 DDI1Q8WTU0 396 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 IL17RAQ96F46 866 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 FAR2Q96K12 515 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 TMEM39AQ9NV64 488 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 WDR35Q9P2L0 1181 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 LIMA1Q9UHB6 759 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 PFASO15067 1338 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 FMN2Q9NZ56 1722 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 ZNF609O15014 1411 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 CCDC189A1A4V9 331 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 IFRD1O00458 451 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 ADCY3O60266 1144 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 NDUFS2O75306 463 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 DAB1O75553 588 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 EIF2S1P05198 315 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 ENO2P09104 434 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 CKBP12277 381 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 NR1D1P20393 614 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 DNAJB2P25686 324 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 ARFIP2P53365 341 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 COASYQ13057 564 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SF3B3Q15393 1217 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 BARGINQ6ZT62 677 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 CARNMT1Q8N4J0 409 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 IPMKQ8NFU5 416 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 RNASE11Q8TAA1 199 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 AGBL1Q96MI9 1066 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 TRPM5Q9NZQ8 1165 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 PPIEQ9UNP9 301 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 F5H5T6 163 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 PALMO75781 387 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SLC2A3P11169 496 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 NPY2RP49146 381 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 CUL3Q13618 768 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 LAMC2Q13753 1193 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 RABGAP1LQ5R372 815 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 PRAMEF18Q5VWM3 479 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 HIBCHQ6NVY1 386 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 COMMD2Q86X83 199 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SLC44A2Q8IWA5 706 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 CCDC60Q8IWA6 550 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 KCTD17Q8N5Z5 321 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SLC44A5Q8NCS7 719 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 OSCP1Q8WVF1 389 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 RPRD1AQ96P16 312 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 XPO6Q96QU8 1125 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 C17orf80Q9BSJ5 609 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 KRT84Q9NSB2 600 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 HSPBP1Q9NZL4 362 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 ZNF229Q9UJW7 825 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 VPS9D1Q9Y2B5 631 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 DYRK1BQ9Y463 629 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 HBP1O60381 514 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 SEC24DO94855 1032 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 FAM200BP0CF97 657 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 NCAM1P13591 858 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 KLRC2P26717 231 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 NUP62P37198 522 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 TRIP4Q15650 581 aaPredicted RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 EFCAB12Q6NXP0 572 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 FOXR1Q6PIV2 292 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 HDDC2Q7Z4H3 204 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 MRPL48Q96GC5 212 aaKnown RBP6.03□□□□□ -1.44
USP38-203ENST00000511739 NT5C1AQ9BXI3 368 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 RIC8BQ9NVN3 520 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 CYP39A1Q9NYL5 469 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 EMSYQ7Z589 1322 aa6.03□□□□□ -1.44
USP38-203ENST00000511739 PDZK1P1A8MUH7 402 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms