RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TRIM43Q96BQ3 446 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 SLC46A1Q96NT5 459 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 MOGAT1Q96PD6 335 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 DPH1Q9BZG8 443 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZNF768Q9H5H4 540 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 CERS4Q9HA82 394 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 SMURF2Q9HAU4 748 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 AKIP1Q9NQ31 210 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 A1CFQ9NQ94 594 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 STARD7Q9NQZ5 370 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZSCAN32Q9NX65 697 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 FNIP2Q9P278 1114 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 TAGLN3Q9UI15 199 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 CHST2Q9Y4C5 530 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 CEP83Q9Y592 693 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 PAXBP1Q9Y5B6 917 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 RAD54BQ9Y620 910 aa4.15□□□□□ -1.75
TRAPPC11-207ENST00000511409 A0A087WWL8 130 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 GRXCR1A8MXD5 290 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 APOL1O14791 398 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 MATN3O15232 486 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 NCK2O43639 380 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 NDUFA10O95299 355 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 ELANEP08246 267 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 XRCC6P12956 609 aaKnown RBP eCLIP4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 KCNA2P16389 499 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 SERPINB3P29508 390 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 TM4SF4P48230 202 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 FAM189BP81408 668 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 MC2RQ01718 297 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 KRT17Q04695 432 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 FPGSQ05932 587 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 RESTQ13127 1097 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 IQCB1Q15051 598 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 TAF2Q6P1X5 1199 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 RNF44Q7L0R7 432 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 PPP1R32Q7Z5V6 425 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 CLNKQ7Z7G1 428 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 MICU3Q86XE3 530 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 TMEM132CQ8N3T6 1108 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZNF276Q8N554 614 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 OR2C3Q8N628 320 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 OR56A3Q8NH54 315 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 IPCEF1Q8WWN9 437 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 SPSB4Q96A44 273 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 TMEM125Q96AQ2 219 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 IQCDQ96DY2 449 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 SNX22Q96L94 193 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 SGCZQ96LD1 299 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 PLEKHG4BQ96PX9 1271 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 MED15Q96RN5 788 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 SPATA5L1Q9BVQ7 753 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 BRIP1Q9BX63 1249 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 SLC46A2Q9BY10 475 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 ALOXE3Q9BYJ1 711 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 SMOC2Q9H3U7 446 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 ARFGAP3Q9NP61 516 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 SERHLQ9NQF3 203 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 TBC1D23Q9NUY8 699 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 ETAA1Q9NY74 926 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 HESX1Q9UBX0 185 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 NEU2Q9Y3R4 380 aa4.14□□□□□ -1.75
TRAPPC11-207ENST00000511409 GAGE12BA1L429 117 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 GAGE12HA6NDE8 117 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 MBD3L4A6NDZ8 208 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 MBD3L3A6NE82 208 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 F5H697 171 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 TPD52L2O43399 206 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 MT-ND5P03915 603 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 CFIP05156 583 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 ATXN1LP0C7T5 689 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 SETSIPP0DME0 302 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 TSHRP16473 764 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 ITGALP20701 1170 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 FDXRP22570 491 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 KLRC1P26715 233 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 HTR3AP46098 478 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 GCLCP48506 637 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 CARSP49589 748 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 MAPK10P53779 464 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 LILRA4P59901 499 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 CXADRP78310 365 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 BTKQ06187 659 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 BOP1Q14137 746 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 GEN1Q17RS7 908 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 CD300EQ496F6 205 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 C10orf62Q5T681 223 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 RRAGBQ5VZM2 374 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 B3GNTL1Q67FW5 361 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 HIBCHQ6NVY1 386 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 TMEM108Q6UXF1 575 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 UNC13DQ70J99 1090 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 SPICE1Q8N0Z3 855 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 TXLNBQ8N3L3 684 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 ATP11CQ8NB49 1132 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 CPEB3Q8NE35 698 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 DEPTORQ8TB45 409 aa4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZNF483Q8TF39 744 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 SLC25A43Q8WUT9 341 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-207ENST00000511409 SLC39A13Q96H72 371 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms