RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 M0QZ92 97 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 ARVCFO00192 962 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 B4GALT5O43286 388 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 RPLP2P05387 115 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 MMEP08473 750 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 GARTP22102 1010 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 COILP38432 576 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 PLTPP55058 493 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 GCNT1Q02742 428 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 CYP24A1Q07973 514 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 ADCY2Q08462 1091 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 FAM187BQ17R55 369 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 SLFN12LQ6IEE8 588 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 ACAD10Q6JQN1 1059 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 CCDC137Q6PK04 289 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 C6orf89Q6UWU4 347 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 FBXO25Q8TCJ0 367 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 STMN4Q9H169 189 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 AVENQ9NQS1 362 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 RAB20Q9NX57 234 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 ANKFY1Q9P2R3 1169 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 DNAH12Q6ZR08 3092 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 GOLGA8IPA6NC78 632 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 GOLGA8JA6NMD2 632 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 MYBL1P10243 752 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 PYGMP11217 842 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 DARSP14868 501 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 EIF4BP23588 611 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 RPL21P46778 160 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 CRYBB1P53674 252 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 MRPS6P82932 125 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 PTK7Q13308 1070 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 TTC27Q6P3X3 843 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 RPAINQ86UA6 219 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 ZNF677Q86XU0 584 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 MAIP1Q8WWC4 291 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 DDX1Q92499 740 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 DHX38Q92620 1227 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 TRIM11Q96F44 468 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 ACO2Q99798 780 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 SENP6Q9GZR1 1112 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 LRRC19Q9H756 370 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 PPANQ9NQ55 473 aaKnown RBP17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 STYXL1Q9Y6J8 313 aa17.04■□□□□ 0.32
SQSTM1-213ENST00000510187 CLDN3O15551 220 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 B4GALT4O60513 344 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 TOM1L1O75674 476 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 AGTP01019 485 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 MAN1A1P33908 653 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 THPOP40225 353 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 GJA8P48165 433 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 SIX1Q15475 284 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 AMHR2Q16671 573 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 CLEC16AQ2KHT3 1053 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 C6orf118Q5T5N4 469 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 AADACL2Q6P093 401 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 TSHZ1Q6ZSZ6 1077 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 SYDE1Q6ZW31 735 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 CNPY4Q8N129 248 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 RAPGEF5Q92565 580 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 P3H4Q92791 437 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 ART4Q93070 314 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 SAAL1Q96ER3 474 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 TCHPQ9BT92 498 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 SEZ6LQ9BYH1 1024 aa17.03■□□□□ 0.32
SQSTM1-213ENST00000510187 CTSHP09668 335 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 RARGP13631 454 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 FGFR4P22455 802 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 SNX17Q15036 470 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 MMS22LQ6ZRQ5 1243 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 SUGP1Q8IWZ8 645 aaKnown RBP17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 ZDHHC14Q8IZN3 488 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 GPD1LQ8N335 351 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 TAS1R2Q8TE23 839 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 TMEM40Q8WWA1 233 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 RNF25Q96BH1 459 aaPredicted RBP17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 CCDC127Q96BQ5 260 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 TRPV2Q9Y5S1 764 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 CDY2AQ9Y6F7 541 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 CNTNAP2Q9UHC6 1331 aa17.02■□□□□ 0.32
SQSTM1-213ENST00000510187 FSCN2O14926 492 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 ATMINO43313 823 aaPredicted RBP17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 TSPAN1O60635 241 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 CAND2O75155 1236 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 ECEL1O95672 775 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 SLC1A1P43005 524 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 MNX1P50219 401 aaPredicted RBP17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 CDK7P50613 346 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 ERMARDQ5T6L9 678 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 CATSPER4Q7RTX7 472 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 ZBTB33Q86T24 672 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 CCDC105Q8IYK2 499 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 TATDN2Q93075 761 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 MSTO1Q9BUK6 570 aa17.01■□□□□ 0.31
SQSTM1-213ENST00000510187 HAPLN2Q9GZV7 340 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms