RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PPP1R15BQ5SWA1 713 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 NIPA2Q8N8Q9 360 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 RNF149Q8NC42 400 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 MAGEB18Q96M61 343 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 TGS1Q96RS0 853 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 CPSF3Q9UKF6 684 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 SOWAHBA6NEL2 793 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 TNNC2P02585 160 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 WEE2P0C1S8 567 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 ZSCAN5DPP0CG00 497 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 RDXP35241 583 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 OGDHQ02218 1023 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 FAM133BQ5BKY9 247 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 SMYD5Q6GMV2 418 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 SCARA5Q6ZMJ2 495 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 NCAPG2Q86XI2 1143 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 GLIS1Q8NBF1 620 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 TRPM4Q8TD43 1214 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 GH1P01241 217 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 TREML2Q5T2D2 321 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 SPATA21Q7Z572 469 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 WDTC1Q8N5D0 677 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 GBP7Q8N8V2 638 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 CCDC63Q8NA47 563 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 NKD2Q969F2 451 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 ANKRD36BP1Q96IX9 119 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 ABCF3Q9NUQ8 709 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 EURLQ9NYK6 297 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 BTBD7Q9P203 1132 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 ARL2BPQ9Y2Y0 163 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 ITGAVP06756 1048 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 PECAM1P16284 738 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 MARK3P27448 753 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 CDKN2BP42772 138 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 LACTBP83111 547 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 IL9RQ01113 521 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 PDE4CQ08493 712 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 LY6KQ17RY6 165 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 CYP4A22Q5TCH4 519 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 POLNQ7Z5Q5 900 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 HAUS1Q96CS2 278 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 UBN1Q9NPG3 1134 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 AGTPBP1Q9UPW5 1226 aa18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.91■□□□□ 0.62
CCHCR1-228ENST00000509552 FAM47DPA6NHR8 397 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 SGK1O00141 431 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 MED7O43513 233 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 PEX10O60683 326 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 ETS1P14921 441 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 ADCY1Q08828 1119 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 OASLQ15646 514 aaKnown RBP18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 TMEM132AQ24JP5 1023 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 TXNRD3NBQ6F5E7 133 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 CENPUQ71F23 418 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 TFAP2BQ92481 460 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 MAML1Q92585 1016 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 ACSF2Q96CM8 615 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 MPHOSPH6Q99547 160 aaKnown RBP18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 PCDH9Q9HC56 1237 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 CFAP73A6NFT4 308 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 PSMA2P25787 234 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 ASPAP45381 313 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 MPZL3Q6UWV2 235 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 TDRPQ86YL5 185 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 THNSL1Q8IYQ7 743 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 LRRC71Q8N4P6 559 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 SPATC1LQ9H0A9 340 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 VPS37BQ9H9H4 285 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 CD248Q9HCU0 757 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 SHOC2Q9UQ13 582 aa18.9■□□□□ 0.62
CCHCR1-228ENST00000509552 NOP56O00567 594 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 IFNB1P01574 187 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 KRT7P08729 469 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 HOXC6P09630 235 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 KRT3P12035 628 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 CD19P15391 556 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 ZKSCAN8Q15776 578 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 HADHQ16836 314 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 PCGF5Q86SE9 256 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 GRAMD1AQ96CP6 724 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 TMEM121Q9BTD3 319 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 SSC5DA1L4H1 1573 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 POC1B-GALNT4F8VUJ3 575 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 GOLGA8SH3BPF8 625 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 ABLIM1O14639 778 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 USP2O75604 605 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 UBOX5O94941 541 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 RNASEH2BQ5TBB1 312 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 TSHZ1Q6ZSZ6 1077 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 RHPN2Q8IUC4 686 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 FRMD8P1Q9BZ68 369 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 PPCSQ9HAB8 311 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 NXF1Q9UBU9 619 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 EFR3BQ9Y2G0 817 aa18.89■□□□□ 0.61
CCHCR1-228ENST00000509552 SIGLEC16A6NMB1 481 aa18.88■□□□□ 0.61
CCHCR1-228ENST00000509552 ALOX15BO15296 676 aa18.88■□□□□ 0.61
CCHCR1-228ENST00000509552 MGRN1O60291 552 aa18.88■□□□□ 0.61
CCHCR1-228ENST00000509552 B4GALT4O60513 344 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms