RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 CLIC6Q96NY7 704 aa16.62■□□□□ 0.25
SMAD5-205ENST00000509297 LRRC3BQ96PB8 259 aa16.62■□□□□ 0.25
SMAD5-205ENST00000509297 SEPT5Q99719 369 aaPredicted RBP16.62■□□□□ 0.25
SMAD5-205ENST00000509297 HINFPQ9BQA5 517 aa16.62■□□□□ 0.25
SMAD5-205ENST00000509297 IKZF4Q9H2S9 585 aa16.62■□□□□ 0.25
SMAD5-205ENST00000509297 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
SMAD5-205ENST00000509297 SCN1AP35498 2009 aa16.62■□□□□ 0.25
SMAD5-205ENST00000509297 TICRRQ7Z2Z1 1910 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 DPYSL4O14531 572 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 PAPSS2O95340 614 aaPredicted RBP16.61■□□□□ 0.25
SMAD5-205ENST00000509297 GCNT3O95395 438 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 CCNE1P24864 410 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 NFE2Q16621 373 aaPredicted RBP16.61■□□□□ 0.25
SMAD5-205ENST00000509297 MGAT5BQ3V5L5 792 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 TSSK4Q6SA08 328 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 SPEM1Q8N4L4 309 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
SMAD5-205ENST00000509297 LEO1Q8WVC0 666 aaPredicted RBP16.61■□□□□ 0.25
SMAD5-205ENST00000509297 SECISBP2LQ93073 1101 aaKnown RBP16.61■□□□□ 0.25
SMAD5-205ENST00000509297 RMDN1Q96DB5 314 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 GCNAQ96QF7 691 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 LPIN3Q9BQK8 851 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 FAM213AQ9BRX8 229 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 TMEM206Q9H813 350 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 ABCB6Q9NP58 842 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 DLL3Q9NYJ7 618 aa16.61■□□□□ 0.25
SMAD5-205ENST00000509297 SMG5Q9UPR3 1016 aaKnown RBP16.61■□□□□ 0.25
SMAD5-205ENST00000509297 KIAA0391O15091 583 aaKnown RBP16.6■□□□□ 0.25
SMAD5-205ENST00000509297 EXTL3O43909 919 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 DDX6P26196 483 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMAD5-205ENST00000509297 CTHP32929 405 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 STAT6P42226 847 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 KPNA1P52294 538 aaPredicted RBP16.6■□□□□ 0.25
SMAD5-205ENST00000509297 TSPY1Q01534 308 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 PUM1Q14671 1186 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMAD5-205ENST00000509297 DGKKQ5KSL6 1271 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 TMEM86AQ8N2M4 240 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 SYNPOQ8N3V7 929 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 DCLK2Q8N568 766 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 C1orf127Q8N9H9 656 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 CXorf38Q8TB03 319 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 BPIFB1Q8TDL5 484 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 USP28Q96RU2 1077 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 GDAP2Q9NXN4 497 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 RBAKQ9NYW8 714 aaPredicted RBP16.6■□□□□ 0.25
SMAD5-205ENST00000509297 NCDNQ9UBB6 729 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 ITGA11Q9UKX5 1188 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 PCDHB5Q9Y5E4 795 aa16.6■□□□□ 0.25
SMAD5-205ENST00000509297 NUP210Q8TEM1 1887 aaPredicted RBP16.6■□□□□ 0.25
SMAD5-205ENST00000509297 SLC38A8A6NNN8 435 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 SPECC1L-ADORA2AF8WAN1 911 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 PRAMEF12O95522 483 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 HMGA1P17096 107 aaKnown RBP16.59■□□□□ 0.25
SMAD5-205ENST00000509297 CXCL12P48061 93 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 NASPP49321 788 aaPredicted RBP16.59■□□□□ 0.25
SMAD5-205ENST00000509297 CASP5P51878 434 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 WNT7BP56706 349 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 TFAMQ00059 246 aaKnown RBP16.59■□□□□ 0.25
SMAD5-205ENST00000509297 GAS6Q14393 721 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 TAF12Q16514 161 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 SYCP3Q8IZU3 236 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 CELF5Q8N6W0 485 aaKnown RBP16.59■□□□□ 0.25
SMAD5-205ENST00000509297 SLC46A2Q9BY10 475 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 PANK4Q9NVE7 773 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 THG1LQ9NWX6 298 aaKnown RBP16.59■□□□□ 0.25
SMAD5-205ENST00000509297 ABI2Q9NYB9 513 aaPredicted RBP16.59■□□□□ 0.25
SMAD5-205ENST00000509297 TBC1D7Q9P0N9 293 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 AGAP1Q9UPQ3 857 aa16.59■□□□□ 0.25
SMAD5-205ENST00000509297 A0A087X0B3 334 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 HUS1O60921 280 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 F11P03951 625 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 ITGB3P05106 788 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 IDEP14735 1019 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 SDHBP21912 280 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 POLR2BP30876 1174 aaKnown RBP16.58■□□□□ 0.24
SMAD5-205ENST00000509297 HOXA6P31267 233 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 NLRP12P59046 1061 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 CEBPZQ03701 1054 aaKnown RBP16.58■□□□□ 0.24
SMAD5-205ENST00000509297 STXBP4Q6ZWJ1 553 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 TMEM150AQ86TG1 271 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 CCDC65Q8IXS2 484 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 CMTM8Q8IZV2 173 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 SAAL1Q96ER3 474 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 CBWD1Q9BRT8 395 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 LRRC27Q9C0I9 530 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 TNMDQ9H2S6 317 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 L1RE1Q9UN81 338 aa16.58■□□□□ 0.24
SMAD5-205ENST00000509297 STX6O43752 255 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 CSH1P0DML2 217 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 CSH2P0DML3 217 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 CNR2P34972 360 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 SOX9P48436 509 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 RPL10AP62906 217 aaKnown RBP16.57■□□□□ 0.24
SMAD5-205ENST00000509297 RBP5P82980 135 aa16.57■□□□□ 0.24
SMAD5-205ENST00000509297 CYP4F8P98187 520 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms