RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 CCHCR1Q8TD31 782 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 KLHL32Q96NJ5 620 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 ACTRT3Q9BYD9 372 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 DLL3Q9NYJ7 618 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 JKAMPQ9P055 326 aa3.01□□□□□ -1.93
XRCC4-204ENST00000509268 SCAF8Q9UPN6 1271 aaKnown RBP3.01□□□□□ -1.93
XRCC4-204ENST00000509268 POC1B-GALNT4F8VUJ3 575 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 H3BNX3 289 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 NDUFV1P49821 464 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 CCT2P78371 535 aaKnown RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 SEPT2Q15019 361 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 PABPC1LQ4VXU2 614 aaKnown RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 TRIM72Q6ZMU5 477 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 PIM3Q86V86 326 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 LRRTM3Q86VH5 581 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 GALNT4Q8N4A0 578 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 NSUN7Q8NE18 718 aaKnown RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 IL17RDQ8NFM7 739 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 TRIB1Q96RU8 372 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 SMOQ99835 787 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 TANGO6Q9C0B7 1094 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 KLHL13Q9P2N7 655 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 SQORQ9Y6N5 450 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 MYBBP1AQ9BQG0 1328 aaKnown RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 NOTCH3Q9UM47 2321 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 H7C1Q1 480 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 DSCR3O14972 297 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 TOMM40O96008 361 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 CHRM5P08912 532 aaPredicted RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 MALLQ13021 153 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 SQSTM1Q13501 440 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 MEX3CQ5U5Q3 659 aaKnown RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 TAPT1Q6NXT6 567 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 ZNF813Q6ZN06 617 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 PPM1KQ8N3J5 372 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 ZGPATQ8N5A5 531 aaKnown RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 AOPEPQ8N6M6 819 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 RITA1Q96K30 269 aa3□□□□□ -1.93
XRCC4-204ENST00000509268 TRMT13Q9NUP7 481 aaKnown RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 ZBTB32Q9Y2Y4 487 aaPredicted RBP3□□□□□ -1.93
XRCC4-204ENST00000509268 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.99□□□□□ -1.93
XRCC4-204ENST00000509268 ADAM10O14672 748 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 SLC43A1O75387 559 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 USP1O94782 785 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 ANXA1P04083 346 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 CYP2C18P33260 490 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 GTF2F1P35269 517 aaKnown RBP eCLIP2.99□□□□□ -1.93
XRCC4-204ENST00000509268 PCBP1Q15365 356 aaKnown RBP eCLIP2.99□□□□□ -1.93
XRCC4-204ENST00000509268 KLHDC4Q8TBB5 520 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 DNASE2BQ8WZ79 361 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 IMPG2Q9BZV3 1241 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 DMRT3Q9NQL9 472 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 TOPORSQ9NS56 1045 aaPredicted RBP2.99□□□□□ -1.93
XRCC4-204ENST00000509268 SH2B3Q9UQQ2 575 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
XRCC4-204ENST00000509268 ASMTLO95671 621 aa2.98□□□□□ -1.93
XRCC4-204ENST00000509268 CYP4F2P78329 520 aa2.98□□□□□ -1.93
XRCC4-204ENST00000509268 GHRHRQ02643 423 aa2.98□□□□□ -1.93
XRCC4-204ENST00000509268 KCNK18Q7Z418 384 aa2.98□□□□□ -1.93
XRCC4-204ENST00000509268 PIP4P1Q86T03 277 aa2.98□□□□□ -1.93
XRCC4-204ENST00000509268 DTX2Q86UW9 622 aa2.98□□□□□ -1.93
XRCC4-204ENST00000509268 CYP2W1Q8TAV3 490 aa2.98□□□□□ -1.93
XRCC4-204ENST00000509268 FAM136AQ96C01 138 aa2.98□□□□□ -1.93
XRCC4-204ENST00000509268 DAZAP1Q96EP5 407 aaKnown RBP2.98□□□□□ -1.93
XRCC4-204ENST00000509268 ERRFI1Q9UJM3 462 aaPredicted RBP2.98□□□□□ -1.93
XRCC4-204ENST00000509268 ZMYM2Q9UBW7 1377 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 FZD9O00144 591 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 NTN3O00634 580 aaPredicted RBP2.97□□□□□ -1.93
XRCC4-204ENST00000509268 GRM6O15303 877 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 PSG1P11464 419 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 CYP2A6P11509 494 aaPredicted RBP2.97□□□□□ -1.93
XRCC4-204ENST00000509268 SESN3P58005 492 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 ATP13A4Q4VNC1 1196 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 ZNF585BQ52M93 769 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 DAB2IPQ5VWQ8 1189 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 NAPRTQ6XQN6 538 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 ZNF365Q70YC5 407 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 RFX6Q8HWS3 928 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 SLC17A8Q8NDX2 589 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 PACSIN1Q9BY11 444 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 CHMP4AQ9BY43 222 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 DUSP22Q9NRW4 184 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 PI4KBQ9UBF8 816 aa2.97□□□□□ -1.93
XRCC4-204ENST00000509268 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.93
XRCC4-204ENST00000509268 LACTBL1A8MY62 500 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 B4DGG1 531 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 UBE2Q2LH0YL09 131 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 SLC28A2O43868 658 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 TNFRSF1BP20333 461 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 ME1P48163 572 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 CNNM4Q6P4Q7 775 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 MAVSQ7Z434 540 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 FAM109AQ8N4B1 249 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 DCBLD1Q8N8Z6 715 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 FAM84BQ96KN1 310 aaPredicted RBP2.96□□□□□ -1.94
XRCC4-204ENST00000509268 ZPBPQ9BS86 351 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 FSD1LQ9BXM9 530 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 FAM234AQ9H0X4 552 aa2.96□□□□□ -1.94
XRCC4-204ENST00000509268 SELENONQ9NZV5 590 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms