RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 TUBA8Q9NY65 449 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 ETAA1Q9NY74 926 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 SAP30BPQ9UHR5 308 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 K7ESF4 209 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 NXPH3O95157 252 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 TKTP29401 623 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 MMP13P45452 471 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 POLGP54098 1239 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 ANKRD16Q6P6B7 361 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 SLC29A4Q7RTT9 530 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 FAM109AQ8N4B1 249 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 SPATA3Q8NHX4 192 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 ATRIPQ8WXE1 791 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 SCAMP4Q969E2 229 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 HMCESQ96FZ2 354 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 TMEM79Q9BSE2 394 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 SMOC2Q9H3U7 446 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 CNTNAP2Q9UHC6 1331 aa5.63□□□□□ -1.51
TRAPPC13-209ENST00000508304 TRIM75PA6NK02 468 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 SMIM22K7EJ46 135 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 ZNF260Q3ZCT1 412 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 AARS2Q5JTZ9 985 aaKnown RBP5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 RBM20Q5T481 1227 aaKnown RBP5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 PDSS2Q86YH6 399 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 SAMD14Q8IZD0 417 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 KLHDC4Q8TBB5 520 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 HDAC10Q969S8 669 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 MTMR4Q9NYA4 1195 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 CALCOCO1Q9P1Z2 691 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 TUBD1Q9UJT1 453 aa5.62□□□□□ -1.51
TRAPPC13-209ENST00000508304 CYP2D7A0A087X1C5 515 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 SMIM35A0A1B0GVV1 85 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 H0YIZ8 118 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 H3BNC9 293 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 TAF2Q6P1X5 1199 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 CATSPERGQ6ZRH7 1159 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 ZNF804AQ7Z570 1209 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 GALNT16Q8N428 558 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 FANCBQ8NB91 859 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 PSD4Q8NDX1 1056 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 COG1Q8WTW3 980 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 FAM136AQ96C01 138 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 DMRTA2Q96SC8 542 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 PUS7LQ9H0K6 701 aaKnown RBP5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 SLC5A4Q9NY91 659 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 LRP12Q9Y561 859 aa5.61□□□□□ -1.51
TRAPPC13-209ENST00000508304 KCNU1A8MYU2 1149 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 SOAT2O75908 522 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 DNAJB5O75953 348 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 KLF1Q13351 362 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 DAZAP2Q15038 168 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 CLUL1Q15846 466 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 ZNF618Q5T7W0 954 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 TEDDM1Q5T9Z0 273 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 GADL1Q6ZQY3 521 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 ZDHHC17Q8IUH5 632 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 SERHLQ9NQF3 203 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 MRPS18AQ9NVS2 196 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 IPPQ9Y573 584 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 CACNA1IQ9P0X4 2223 aa5.6□□□□□ -1.51
TRAPPC13-209ENST00000508304 NDUFS2O75306 463 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 SNHG28P0DPA3 235 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 IBSPP21815 317 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 IL10RAQ13651 578 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 CCDC93Q567U6 631 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 NECAB2Q7Z6G3 386 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 CLPTM1LQ96KA5 538 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 CAMKK2Q96RR4 588 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 RLIMQ9NVW2 624 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 DLL3Q9NYJ7 618 aa5.59□□□□□ -1.51
TRAPPC13-209ENST00000508304 HTRA2O43464 458 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 CHEK2O96017 543 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 ITGALP20701 1170 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 EDNRBP24530 442 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 CD6P30203 668 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 ALDH9A1P49189 494 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 EEFSECP57772 596 aaKnown RBP5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 TCF15Q12870 199 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 HABP2Q14520 560 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 RABEP1Q15276 862 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 VPS53Q5VIR6 699 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 WDR53Q7Z5U6 358 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 DDX42Q86XP3 938 aaKnown RBP eCLIP5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 C8orf58Q8NAV2 365 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 CNPPD1Q9BV87 410 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 SIDT1Q9NXL6 827 aaKnown RBP5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 LIMCH1Q9UPQ0 1083 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 ATP8A1Q9Y2Q0 1164 aa5.58□□□□□ -1.52
TRAPPC13-209ENST00000508304 PHLDB1Q86UU1 1377 aa5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 F2RL2O00254 374 aa5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 PPM1DO15297 605 aa5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 PDHA1P08559 390 aa5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 ARHGAP25P42331 645 aa5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 TOB1P50616 345 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 PLCD1P51178 756 aa5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 SLC16A1P53985 500 aa5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 PSMC1P62191 440 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 TRIP6Q15654 476 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-209ENST00000508304 C3orf36Q3SXR2 165 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms