RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 LRRIQ3A6PVS8 624 aaPredicted RBP10.07□□□□□ -0.8
DDX41-209ENST00000508279 PDXKO00764 312 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 GADD45BO75293 160 aaPredicted RBP10.07□□□□□ -0.8
DDX41-209ENST00000508279 POU2F2P09086 479 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 PDGFRBP09619 1106 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 NR2F2P24468 414 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 CCR2P41597 374 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 MYL6P60660 151 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 PSMC1P62191 440 aaKnown RBP10.07□□□□□ -0.8
DDX41-209ENST00000508279 TNNC1P63316 161 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 FAM160A1Q05DH4 1040 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 SNW1Q13573 536 aaKnown RBP10.07□□□□□ -0.8
DDX41-209ENST00000508279 HTR4Q13639 388 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 KCNB1Q14721 858 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 VEPH1Q14D04 833 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 TEAD2Q15562 447 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 SOWAHAQ2M3V2 549 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 SDHAF4Q5VUM1 108 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 SCARA5Q6ZMJ2 495 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 MTSS1LQ765P7 747 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 SIX5Q8N196 739 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 TMEM86AQ8N2M4 240 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 FBXL6Q8N531 539 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 TOP6BLQ8N6T0 577 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 STKLD1Q8NE28 680 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 CXorf38Q8TB03 319 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 PLEKHO2Q8TD55 490 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 GPR152Q8TDT2 470 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 SMARCE1Q969G3 411 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 DNAJC25Q9H1X3 360 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 TMLHEQ9NVH6 421 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 RMND1Q9NWS8 449 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 GDAP2Q9NXN4 497 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 NXF1Q9UBU9 619 aaKnown RBP10.07□□□□□ -0.8
DDX41-209ENST00000508279 HOOK1Q9UJC3 728 aaKnown RBP10.07□□□□□ -0.8
DDX41-209ENST00000508279 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 PCDHB5Q9Y5E4 795 aa10.07□□□□□ -0.8
DDX41-209ENST00000508279 ZFP37Q9Y6Q3 630 aaPredicted RBP10.07□□□□□ -0.8
DDX41-209ENST00000508279 DENND4CQ5VZ89 1909 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 ANHXE9PGG2 379 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 NRG2O14511 850 aaPredicted RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 KINO60870 393 aaKnown RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 ATP2C2O75185 946 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 SMC2O95347 1197 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 PCSK1P29120 753 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 LHX1P48742 406 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 TUFMP49411 452 aaKnown RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 GPR15P49685 360 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 VCPP55072 806 aaKnown RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 DLG4P78352 724 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 CCDC142Q17RM4 750 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 WDR72Q3MJ13 1102 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 INTS6LQ5JSJ4 861 aaKnown RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 PRSS36Q5K4E3 855 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 TDRD10Q5VZ19 366 aaKnown RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 DNAJB7Q7Z6W7 309 aaPredicted RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 ITIH5Q86UX2 942 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 SPATA2LQ8IUW3 424 aaPredicted RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 SLC9A9Q8IVB4 645 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 SCN4BQ8IWT1 228 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 OR6B3Q8NGW1 331 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 SPPL2BQ8TCT7 592 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 PARD3BQ8TEW8 1205 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 NXPE3Q969Y0 559 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 EEF2KMTQ96G04 330 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 SYT15Q9BQS2 421 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 ACBD6Q9BR61 282 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 SNX25Q9H3E2 840 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 ATXN3LQ9H3M9 355 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 DMAC2Q9NW81 257 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 MAGED2Q9UNF1 606 aaPredicted RBP10.06□□□□□ -0.8
DDX41-209ENST00000508279 ZDBF2Q9HCK1 2354 aa10.06□□□□□ -0.8
DDX41-209ENST00000508279 MYBPHLA2RUH7 354 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 TRIM49P0CI25 452 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 TRIM49CP0CI26 452 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 HAPLN1P10915 354 aaPredicted RBP10.05□□□□□ -0.8
DDX41-209ENST00000508279 SRFP11831 508 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 KRT13P13646 458 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 ATF6P18850 670 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 CYP2F1P24903 491 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 LMO2P25791 158 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 RPL13P26373 211 aaKnown RBP10.05□□□□□ -0.8
DDX41-209ENST00000508279 GABRR2P28476 465 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 GNL1P36915 607 aaPredicted RBP10.05□□□□□ -0.8
DDX41-209ENST00000508279 PIK3CAP42336 1068 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 RAP1GAPP47736 663 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 VAMP7P51809 220 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 GPC5P78333 572 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 CYP27A1Q02318 531 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 SMARCB1Q12824 385 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 ADAM9Q13443 819 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 NCOA4Q13772 614 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 GRM2Q14416 872 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 NFE2Q16621 373 aaPredicted RBP10.05□□□□□ -0.8
DDX41-209ENST00000508279 DDR2Q16832 855 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 ZNF699Q32M78 642 aa10.05□□□□□ -0.8
DDX41-209ENST00000508279 STXBP5Q5T5C0 1151 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms