RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 RECQL4O94761 1208 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 GPANK1O95872 356 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 FGFR4P22455 802 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 FDXRP22570 491 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 BTKQ06187 659 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 STK3Q13188 491 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 PMS2P11Q13670 270 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 LONRF3Q496Y0 759 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 FOXR2Q6PJQ5 311 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 TTLL10Q6ZVT0 673 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 UNC13DQ70J99 1090 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 GDF7Q7Z4P5 450 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 PPP1R32Q7Z5V6 425 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 ATP11CQ8NB49 1132 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 CPT1CQ8TCG5 803 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 RAPGEF4Q8WZA2 1011 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 SPATA5L1Q9BVQ7 753 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 MS4A7Q9GZW8 240 aaPredicted RBP7.17□□□□□ -1.26
HERC4-213ENST00000506515 MYH16Q9H6N6 1097 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 ARFGAP3Q9NP61 516 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 GJB4Q9NTQ9 266 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 PCDHGB2Q9Y5G2 931 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 POLA1P09884 1462 aaPredicted RBP7.17□□□□□ -1.26
HERC4-213ENST00000506515 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 PLEKHD1A6NEE1 506 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 F5H423 210 aaPredicted RBP7.16□□□□□ -1.26
HERC4-213ENST00000506515 MT-ND5P03915 603 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 SELENOPP49908 381 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 HTRA4P83105 476 aaPredicted RBP7.16□□□□□ -1.26
HERC4-213ENST00000506515 BOP1Q14137 746 aaKnown RBP7.16□□□□□ -1.26
HERC4-213ENST00000506515 PRKD1Q15139 912 aaPredicted RBP7.16□□□□□ -1.26
HERC4-213ENST00000506515 MAPKAPK5Q8IW41 473 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 ENAHQ8N8S7 591 aaPredicted RBP7.16□□□□□ -1.26
HERC4-213ENST00000506515 PSD4Q8NDX1 1056 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 IQCDQ96DY2 449 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 LRIG1Q96JA1 1093 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 SLC46A1Q96NT5 459 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 SERHLQ9NQF3 203 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 ETAA1Q9NY74 926 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 HESX1Q9UBX0 185 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 CDC23Q9UJX2 597 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 HDAC9Q9UKV0 1011 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 TBC1D30Q9Y2I9 924 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 MTO1Q9Y2Z2 717 aaKnown RBP7.16□□□□□ -1.26
HERC4-213ENST00000506515 CHST2Q9Y4C5 530 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 PAXBP1Q9Y5B6 917 aa7.16□□□□□ -1.26
HERC4-213ENST00000506515 CCDC195A0A1B0GUA6 201 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 MBD3L4A6NDZ8 208 aaPredicted RBP7.15□□□□□ -1.26
HERC4-213ENST00000506515 MBD3L3A6NE82 208 aaPredicted RBP7.15□□□□□ -1.26
HERC4-213ENST00000506515 FAM20BO75063 409 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 FGF18O76093 207 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 SPATA31D3P0C874 917 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 HARSP12081 509 aaKnown RBP7.15□□□□□ -1.26
HERC4-213ENST00000506515 KLRC1P26715 233 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 CARSP49589 748 aaKnown RBP7.15□□□□□ -1.26
HERC4-213ENST00000506515 MAPK10P53779 464 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 OCA2Q04671 838 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 TCF15Q12870 199 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 ARL13BQ3SXY8 428 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 TAF2Q6P1X5 1199 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 SPATA31D4Q6ZUB0 917 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 PALM2Q8IXS6 379 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 ZNF483Q8TF39 744 aaPredicted RBP7.15□□□□□ -1.26
HERC4-213ENST00000506515 SPSB4Q96A44 273 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 C8orf49Q96NF6 230 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 CHST8Q9H2A9 424 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 ZNF768Q9H5H4 540 aaKnown RBP7.15□□□□□ -1.26
HERC4-213ENST00000506515 TBC1D23Q9NUY8 699 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 CEP83Q9Y592 693 aa7.15□□□□□ -1.26
HERC4-213ENST00000506515 SNAPC4Q5SXM2 1469 aa7.15□□□□□ -1.27
HERC4-213ENST00000506515 CLASP1Q7Z460 1538 aa7.15□□□□□ -1.27
HERC4-213ENST00000506515 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 GRXCR1A8MXD5 290 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 AHRRA9YTQ3 701 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 TOR1BO14657 336 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 TRIM24O15164 1050 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 ANXA2P07355 339 aaKnown RBP7.14□□□□□ -1.27
HERC4-213ENST00000506515 ELANEP08246 267 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 IL1R1P14778 569 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 FGFR2P21802 821 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 ACRV1P26436 265 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 TOB1P50616 345 aaPredicted RBP7.14□□□□□ -1.27
HERC4-213ENST00000506515 CTSWP56202 376 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 IQCB1Q15051 598 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 RABL3Q5HYI8 236 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 DGKKQ5KSL6 1271 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 RRAGBQ5VZM2 374 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 ERICH6BQ5W0A0 696 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 ZDHHC24Q6UX98 284 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 RNF44Q7L0R7 432 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 TXLNBQ8N3L3 684 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 POF1BQ8WVV4 589 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 BRI3BPQ8WY22 251 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 MED15Q96RN5 788 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 COLEC11Q9BWP8 271 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 KLC2Q9H0B6 622 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 SMOC2Q9H3U7 446 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 PTPRHQ9HD43 1115 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 TRMT13Q9NUP7 481 aaKnown RBP7.14□□□□□ -1.27
HERC4-213ENST00000506515 RNF181Q9P0P0 153 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms