RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ACBD6Q9BR61 282 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 DNAJC25Q9H1X3 360 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 ABI2Q9NYB9 513 aaPredicted RBP16.68■□□□□ 0.26
MED28-204ENST00000506409 HOOK1Q9UJC3 728 aaKnown RBP16.68■□□□□ 0.26
MED28-204ENST00000506409 LRRIQ3A6PVS8 624 aaPredicted RBP16.67■□□□□ 0.26
MED28-204ENST00000506409 NARSO43776 548 aaKnown RBP16.67■□□□□ 0.26
MED28-204ENST00000506409 PHACTR2O75167 634 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 MICAL2O94851 1124 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 SMC2O95347 1197 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 ACAT1P24752 427 aaKnown RBP16.67■□□□□ 0.26
MED28-204ENST00000506409 PCSK1P29120 753 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 CCR2P41597 374 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 AP3M2P53677 418 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 EPHA5P54756 1037 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 BIRC3Q13489 604 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 NFE2Q16621 373 aaPredicted RBP16.67■□□□□ 0.26
MED28-204ENST00000506409 NFIL3Q16649 462 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 INTS6LQ5JSJ4 861 aaKnown RBP16.67■□□□□ 0.26
MED28-204ENST00000506409 OSTM1Q86WC4 334 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 SMYD4Q8IYR2 804 aaPredicted RBP16.67■□□□□ 0.26
MED28-204ENST00000506409 GSDMAQ96QA5 445 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 FBXL21Q9UKT6 434 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 ASB3Q9Y575 518 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
MED28-204ENST00000506409 GABRDO14764 452 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 KINO60870 393 aaKnown RBP16.66■□□□□ 0.26
MED28-204ENST00000506409 PDGFBP01127 241 aaPredicted RBP16.66■□□□□ 0.26
MED28-204ENST00000506409 SRFP11831 508 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
MED28-204ENST00000506409 CLDN10P78369 228 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 VEPH1Q14D04 833 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 TDRD10Q5VZ19 366 aaKnown RBP16.66■□□□□ 0.26
MED28-204ENST00000506409 LIMS2Q7Z4I7 341 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 ITIH5Q86UX2 942 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 FAM200AQ8TCP9 573 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 KBTBD7Q8WVZ9 684 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 ERCC4Q92889 916 aaPredicted RBP16.66■□□□□ 0.26
MED28-204ENST00000506409 SMARCE1Q969G3 411 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 PSMG2Q969U7 264 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 RPP25Q9BUL9 199 aaKnown RBP16.66■□□□□ 0.26
MED28-204ENST00000506409 TMLHEQ9NVH6 421 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 CHMP5Q9NZZ3 219 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 PCDHA5Q9Y5H7 936 aa16.66■□□□□ 0.26
MED28-204ENST00000506409 ZDBF2Q9HCK1 2354 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 HCRTO43612 131 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 CLSTN1O94985 981 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 STAU1O95793 577 aaKnown RBP16.65■□□□□ 0.26
MED28-204ENST00000506409 CFHP08603 1231 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 HAPLN1P10915 354 aaPredicted RBP16.65■□□□□ 0.26
MED28-204ENST00000506409 ATF6P18850 670 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 ATICP31939 592 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 MYL6P60660 151 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 TNNC1P63316 161 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 DLG4P78352 724 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 ZNF658Q5TYW1 1059 aaPredicted RBP16.65■□□□□ 0.26
MED28-204ENST00000506409 DNAJB7Q7Z6W7 309 aaPredicted RBP16.65■□□□□ 0.26
MED28-204ENST00000506409 TMC8Q8IU68 726 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 SPATA20Q8TB22 786 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 TMC2Q8TDI7 906 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 SYAP1Q96A49 352 aaPredicted RBP16.65■□□□□ 0.26
MED28-204ENST00000506409 KXD1Q9BQD3 176 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 LPIN3Q9BQK8 851 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 LRRC3Q9BY71 257 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 MFSD1Q9H3U5 465 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 GTF3C4Q9UKN8 822 aa16.65■□□□□ 0.26
MED28-204ENST00000506409 NRG2O14511 850 aaPredicted RBP16.64■□□□□ 0.25
MED28-204ENST00000506409 MAPK13O15264 365 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 GADD45BO75293 160 aaPredicted RBP16.64■□□□□ 0.25
MED28-204ENST00000506409 MOSPD3O75425 235 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 AKAP3O75969 853 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 C4BPAP04003 597 aaKnown RBP16.64■□□□□ 0.25
MED28-204ENST00000506409 GJA1P17302 382 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 WARSP23381 471 aaKnown RBP16.64■□□□□ 0.25
MED28-204ENST00000506409 ADAM9Q13443 819 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 NCOA4Q13772 614 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 TEAD2Q15562 447 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 TAF12Q16514 161 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 ZCWPW2Q504Y3 356 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 POTEHQ6S545 545 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 INTS8Q75QN2 995 aaKnown RBP16.64■□□□□ 0.25
MED28-204ENST00000506409 SIX5Q8N196 739 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 SHKBP1Q8TBC3 707 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 PKMYT1Q99640 499 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 SYT15Q9BQS2 421 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 PI4K2AQ9BTU6 479 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 XYLT2Q9H1B5 865 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 SLITRK6Q9H5Y7 841 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 ABCB6Q9NP58 842 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 NXF1Q9UBU9 619 aaKnown RBP16.64■□□□□ 0.25
MED28-204ENST00000506409 WNT16Q9UBV4 365 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 CDH9Q9ULB4 789 aa16.64■□□□□ 0.25
MED28-204ENST00000506409 A0A1W2PRU2 124 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 MYBPHLA2RUH7 354 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 IKBKBO14920 756 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 TACC1O75410 805 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 FGF19O95750 216 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 KRT13P13646 458 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 LMO2P25791 158 aa16.63■□□□□ 0.25
MED28-204ENST00000506409 PSMC2P35998 433 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms