RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 FSHRP23945 695 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 GBP2P32456 591 aaPredicted RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 ALDH1A3P47895 512 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 TUFMP49411 452 aaKnown RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 MXI1P50539 228 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 EPHB3P54753 998 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 TWF1Q12792 350 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 MAPRE1Q15691 268 aaKnown RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 PABPC1LQ4VXU2 614 aaKnown RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 INTS6LQ5JSJ4 861 aaKnown RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 KRT39Q6A163 491 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 GET4Q7L5D6 327 aaPredicted RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 GRASPQ7Z6J2 395 aaPredicted RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 LEMD2Q8NC56 503 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 EEF2KMTQ96G04 330 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 TMEM209Q96SK2 561 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 SNX25Q9H3E2 840 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 CD320Q9NPF0 282 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 NXF1Q9UBU9 619 aaKnown RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 ARMCX3Q9UH62 379 aaPredicted RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 PCDHB5Q9Y5E4 795 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 ZFP37Q9Y6Q3 630 aaPredicted RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 VNN1O95497 513 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 FGFR1OPO95684 399 aaKnown RBP17.86■□□□□ 0.45
SNCA-209ENST00000506244 GNA14O95837 355 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 HLA-DRAP01903 254 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 ALADP13716 330 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 PTPN2P17706 415 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 GCLMP48507 274 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 MCCD1P59942 119 aaPredicted RBP17.86■□□□□ 0.45
SNCA-209ENST00000506244 DUSP4Q13115 394 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 VEPH1Q14D04 833 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 CCDC40Q4G0X9 1142 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 DCAF17Q5H9S7 520 aaPredicted RBP17.86■□□□□ 0.45
SNCA-209ENST00000506244 C1orf220Q5T0J3 134 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 TCERG1LQ5VWI1 586 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 SCARA3Q6AZY7 606 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 TTI2Q6NXR4 508 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 C4orf50Q6ZRC1 276 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 ITIH5Q86UX2 942 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 RNF135Q8IUD6 432 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 MLKLQ8NB16 471 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 KBTBD7Q8WVZ9 684 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 ZNF512Q96ME7 567 aaPredicted RBP17.86■□□□□ 0.45
SNCA-209ENST00000506244 SEPT5Q99719 369 aaPredicted RBP17.86■□□□□ 0.45
SNCA-209ENST00000506244 SYT15Q9BQS2 421 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 ABCB6Q9NP58 842 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 AVENQ9NQS1 362 aaPredicted RBP17.86■□□□□ 0.45
SNCA-209ENST00000506244 ABI2Q9NYB9 513 aaPredicted RBP17.86■□□□□ 0.45
SNCA-209ENST00000506244 DACH1Q9UI36 760 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 CDH9Q9ULB4 789 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 ASB3Q9Y575 518 aa17.86■□□□□ 0.45
SNCA-209ENST00000506244 BDP1A6H8Y1 2624 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 ZNF197O14709 1029 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 DCXO43602 365 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 VNN2O95498 520 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 ASS1P00966 412 aaKnown RBP17.85■□□□□ 0.45
SNCA-209ENST00000506244 TRIM21P19474 475 aaKnown RBP17.85■□□□□ 0.45
SNCA-209ENST00000506244 MUC3AQ02505 3323 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 MGAT5BQ3V5L5 792 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 CYP4A22Q5TCH4 519 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 FRMD5Q7Z6J6 570 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 FILIP1Q7Z7B0 1213 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 OSTM1Q86WC4 334 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 ATAD1Q8NBU5 361 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 FEZF2Q8TBJ5 459 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 FUBP3Q96I24 572 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNCA-209ENST00000506244 MMRN2Q9H8L6 949 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 ASAH2Q9NR71 780 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 C5orf42Q9H799 3197 aa17.85■□□□□ 0.45
SNCA-209ENST00000506244 RHOP08100 348 aa17.84■□□□□ 0.45
SNCA-209ENST00000506244 ACAT1P24752 427 aaKnown RBP17.84■□□□□ 0.45
SNCA-209ENST00000506244 NOP14P78316 857 aaKnown RBP17.84■□□□□ 0.45
SNCA-209ENST00000506244 PPP3CAQ08209 521 aa17.84■□□□□ 0.45
SNCA-209ENST00000506244 PDZD4Q76G19 769 aaPredicted RBP17.84■□□□□ 0.45
SNCA-209ENST00000506244 SPATA2LQ8IUW3 424 aaPredicted RBP17.84■□□□□ 0.45
SNCA-209ENST00000506244 FBXL13Q8NEE6 735 aa17.84■□□□□ 0.45
SNCA-209ENST00000506244 OR6B3Q8NGW1 331 aa17.84■□□□□ 0.45
SNCA-209ENST00000506244 CORO1BQ9BR76 489 aa17.84■□□□□ 0.45
SNCA-209ENST00000506244 DNAI2Q9GZS0 605 aa17.84■□□□□ 0.45
SNCA-209ENST00000506244 EPS15L1Q9UBC2 864 aa17.84■□□□□ 0.45
SNCA-209ENST00000506244 DNMT3BQ9UBC3 853 aaKnown RBP17.84■□□□□ 0.45
SNCA-209ENST00000506244 RWDD2AQ9UIY3 292 aa17.84■□□□□ 0.45
SNCA-209ENST00000506244 MRPS23Q9Y3D9 190 aaKnown RBP17.84■□□□□ 0.45
SNCA-209ENST00000506244 N4BP1O75113 896 aaKnown RBP17.83■□□□□ 0.44
SNCA-209ENST00000506244 FGF19O95750 216 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 GNL1P36915 607 aaPredicted RBP17.83■□□□□ 0.44
SNCA-209ENST00000506244 CFAP221Q4G0U5 840 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 SCARA5Q6ZMJ2 495 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 LRRTM3Q86VH5 581 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 FAM200AQ8TCP9 573 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 TAS1R2Q8TE23 839 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 PKMYT1Q99640 499 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 DUSP9Q99956 384 aaKnown RBP17.83■□□□□ 0.44
SNCA-209ENST00000506244 MRPL45Q9BRJ2 306 aaKnown RBP17.83■□□□□ 0.44
SNCA-209ENST00000506244 NIF3L1Q9GZT8 377 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 CRISPLD1Q9H336 500 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 SMYD3Q9H7B4 428 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 HCFC1R1Q9NWW0 138 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 MUTYHQ9UIF7 546 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms