RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 C2orf54Q08AI8 447 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 STILQ15468 1287 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 PTGISQ16647 500 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 ZNF394Q53GI3 561 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 C9orf57Q5W0N0 161 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 TWF2Q6IBS0 349 aaKnown RBP8.55□□□□□ -1.04
COL4A5-208ENST00000505728 MRPL10Q7Z7H8 261 aaKnown RBP8.55□□□□□ -1.04
COL4A5-208ENST00000505728 UNC93AQ86WB7 457 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 SLC4A11Q8NBS3 891 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 SMG8Q8ND04 991 aaKnown RBP8.55□□□□□ -1.04
COL4A5-208ENST00000505728 HNRNPLLQ8WVV9 542 aaKnown RBP8.55□□□□□ -1.04
COL4A5-208ENST00000505728 TFAP2BQ92481 460 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 CD101Q93033 1021 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 MS4A14Q96JA4 679 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 ZNF560Q96MR9 790 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 ZMAT2Q96NC0 199 aaKnown RBP8.55□□□□□ -1.04
COL4A5-208ENST00000505728 PSMB7Q99436 277 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 ZSWIM1Q9BR11 485 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 C11orf70Q9BRQ4 267 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 NT5C1AQ9BXI3 368 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 ELOVL4Q9GZR5 314 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 MIS12Q9H081 205 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 EPC1Q9H2F5 836 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 GOLPH3Q9H4A6 298 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 SMYD3Q9H7B4 428 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 WDR35Q9P2L0 1181 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 TMEM59LQ9UK28 342 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 ZMYND8Q9ULU4 1186 aaPredicted RBP8.55□□□□□ -1.04
COL4A5-208ENST00000505728 HES2Q9Y543 173 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 CDH23Q9H251 3354 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 GRIN2DO15399 1336 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 TMEM110-MUSTN1A8MSY1 372 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ATMINO43313 823 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-208ENST00000505728 SPOPO43791 374 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ZNF623O75123 536 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 PROSCO94903 275 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 COL6A1P12109 1028 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 SKIP12755 728 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ITGA4P13612 1032 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 AKAP5P24588 427 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 RAP1GAPP47736 663 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 PEX5P50542 639 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 RAB27AP51159 221 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 DNA2P51530 1060 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 NDST1P52848 882 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ACLYP53396 1101 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 GSCP56915 257 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-208ENST00000505728 MAMLD1Q13495 774 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ZNF268Q14587 947 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-208ENST00000505728 SGO2Q562F6 1265 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 LHX8Q68G74 356 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 MMS22LQ6ZRQ5 1243 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 FAM43BQ6ZT52 329 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-208ENST00000505728 DPH6Q7L8W6 267 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ERICH1Q86X53 443 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 PASD1Q8IV76 773 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 WDTC1Q8N5D0 677 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ARRDC4Q8NCT1 418 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 FEZF2Q8TBJ5 459 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 HEXIM2Q96MH2 286 aaKnown RBP8.54□□□□□ -1.04
COL4A5-208ENST00000505728 GLT1D1Q96MS3 346 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 TRAIPQ9BWF2 469 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 APOL6Q9BWW8 343 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 C11orf49Q9H6J7 331 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ERVK-5Q9HDB9 667 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 FAM105AQ9NUU6 356 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 SLC38A7Q9NVC3 462 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 PARVAQ9NVD7 372 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 GDAP2Q9NXN4 497 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 ANAPC7Q9UJX3 599 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 STRIP2Q9ULQ0 834 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 GIT1Q9Y2X7 761 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 PCDHA3Q9Y5H8 950 aa8.54□□□□□ -1.04
COL4A5-208ENST00000505728 TCRBV5S1A1TA0A578 114 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 ZRANB2O95218 330 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 MYCNP04198 464 aaPredicted RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 SETSIPP0DME0 302 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 PAX3P23760 479 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 MAN1A1P33908 653 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 BMP8BP34820 402 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 CTNNA1P35221 906 aaKnown RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 THPOP40225 353 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 TAF6P49848 677 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 RWDD2BP57060 319 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 NFX1Q12986 1120 aaKnown RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 DSC3Q14574 896 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 TRIM71Q2Q1W2 868 aaKnown RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 SV2CQ496J9 727 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 MAP9Q49MG5 647 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 FBXO47Q5MNV8 452 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 SEL1L2Q5TEA6 688 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 C8orf74Q6P047 294 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 CC2D1AQ6P1N0 951 aaPredicted RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 DENND1BQ6P3S1 775 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 LCLAT1Q6UWP7 414 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 CCNI2Q6ZMN8 369 aaPredicted RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 LIMS2Q7Z4I7 341 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 SLC43A3Q8NBI5 491 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms