RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 RABEP1Q15276 862 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 SAFBQ15424 915 aaKnown RBP eCLIP5.37□□□□□ -1.55
CDH9-203ENST00000505045 PTPN14Q15678 1187 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 EEF1DP3Q658K8 133 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 OTUD6AQ7L8S5 288 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 TAS1R1Q7RTX1 841 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 TMC7Q7Z402 723 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 MRPL10Q7Z7H8 261 aaKnown RBP5.37□□□□□ -1.55
CDH9-203ENST00000505045 SHISA5Q8N114 240 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 DAW1Q8N136 415 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 VPS52Q8N1B4 723 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 C12orf76Q8N812 135 aaPredicted RBP5.37□□□□□ -1.55
CDH9-203ENST00000505045 IGSF22Q8N9C0 903 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 FAM184AQ8NB25 1140 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 TCP11Q8WWU5 503 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 SUSD6Q92537 303 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 GATA6Q92908 595 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 ZSCAN31Q96LW9 406 aaPredicted RBP5.37□□□□□ -1.55
CDH9-203ENST00000505045 CCDC43Q96MW1 224 aaKnown RBP5.37□□□□□ -1.55
CDH9-203ENST00000505045 CCDC113Q9H0I3 377 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 S1PR5Q9H228 398 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 BHMT2Q9H2M3 363 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 SMOC2Q9H3U7 446 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 TUFT1Q9NNX1 390 aa5.37□□□□□ -1.55
CDH9-203ENST00000505045 DDX19AQ9NUU7 478 aaKnown RBP5.37□□□□□ -1.55
CDH9-203ENST00000505045 PRG3Q9Y2Y8 225 aaPredicted RBP5.37□□□□□ -1.55
CDH9-203ENST00000505045 CNTNAP2Q9UHC6 1331 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 DNAH14Q0VDD8 3507 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 COL4A3Q01955 1670 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 E9PMD0 336 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 PTGESO14684 152 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 NRP1O14786 923 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 NCK2O43639 380 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 CLASP2O75122 1294 aaKnown RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 NPTXRO95502 500 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 EFEMP2O95967 443 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 C8AP07357 584 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 MYBP10242 640 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 GJB2P29033 226 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 CA8P35219 290 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 ALDH7A1P49419 539 aaKnown RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 CDC42EP1Q00587 391 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 GRIN1Q05586 938 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 RNASELQ05823 741 aaKnown RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 DSC1Q08554 894 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 MAPK7Q13164 816 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 GRM2Q14416 872 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 MXD4Q14582 209 aaPredicted RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 CBX2Q14781 532 aaPredicted RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 ANKRD54Q6NXT1 300 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 NOTUMQ6P988 496 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 COLGALT2Q8IYK4 626 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 RNF168Q8IYW5 571 aaPredicted RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 MRPL43Q8N983 215 aaKnown RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 HASPINQ8TF76 798 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 PPP2R3CQ969Q6 453 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 TMEM169Q96HH4 297 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 MFSD14AQ96MC6 490 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 POLR3CQ9BUI4 534 aaPredicted RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 NFKBIZQ9BYH8 718 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 CSRNP2Q9H175 543 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 POMKQ9H5K3 350 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 PDZD7Q9H5P4 517 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 PRKAG3Q9UGI9 489 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 DBR1Q9UK59 544 aaKnown RBP5.36□□□□□ -1.55
CDH9-203ENST00000505045 ACTL7BQ9Y614 415 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 NOTCH4Q99466 2003 aa5.36□□□□□ -1.55
CDH9-203ENST00000505045 TSC2P49815 1807 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 A0A1B0GUA9 196 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 LOC730098B7Z3J9 87 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 INPPL1O15357 1258 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 MEFVO15553 781 aaPredicted RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 ASAP2O43150 1006 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 DCXO43602 365 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 CNPP09543 421 aaKnown RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 CTSAP10619 480 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 ITGA4P13612 1032 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 LIG1P18858 919 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 CYP11B2P19099 503 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 CCT6AP40227 531 aaKnown RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 TRAPPC10P48553 1259 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 GNL2Q13823 731 aaKnown RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 SMC1AQ14683 1233 aaKnown RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 NAB2Q15742 525 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 TMEM31Q5JXX7 168 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 HAUS3Q68CZ6 603 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 TMEM184AQ6ZMB5 413 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 FAM43BQ6ZT52 329 aaPredicted RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 DDX53Q86TM3 631 aaKnown RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 MCPH1Q8NEM0 835 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 EPS8L3Q8TE67 593 aaKnown RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 FBLIM1Q8WUP2 373 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 RPGRIP1Q96KN7 1286 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 PLIN2Q99541 437 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 C1QTNF1Q9BXJ1 281 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 FZD8Q9H461 694 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 NGRNQ9NPE2 291 aaKnown RBP5.35□□□□□ -1.55
CDH9-203ENST00000505045 LRWD1Q9UFC0 647 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 DCTN4Q9UJW0 460 aa5.35□□□□□ -1.55
CDH9-203ENST00000505045 FAM95CA0A1B0GW59 222 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms