RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 WDR49Q8IV35 697 aa27.26■■□□□ 1.95
PVT1-201ENST00000504719 C12orf56Q8IXR9 622 aa27.26■■□□□ 1.95
PVT1-201ENST00000504719 DCP1BQ8IZD4 617 aaKnown RBP27.26■■□□□ 1.95
PVT1-201ENST00000504719 STK25O00506 426 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 GJA1P17302 382 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 FCARP24071 287 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 FAM78AQ5JUQ0 283 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 PHLDB3Q6NSJ2 640 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 DNAJB7Q7Z6W7 309 aaPredicted RBP27.25■■□□□ 1.95
PVT1-201ENST00000504719 TMEM86AQ8N2M4 240 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 KIAA0895Q8NCT3 520 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 SHKBP1Q8TBC3 707 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 SPPL2BQ8TCT7 592 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 PSMG2Q969U7 264 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 CCDC47Q96A33 483 aaKnown RBP27.25■■□□□ 1.95
PVT1-201ENST00000504719 ZSWIM3Q96MP5 696 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 ASB16Q96NS5 453 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 TBC1D17Q9HA65 648 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 SNX9Q9Y5X1 595 aa27.25■■□□□ 1.95
PVT1-201ENST00000504719 CDR1P51861 262 aa27.24■■□□□ 1.95
PVT1-201ENST00000504719 CYP24A1Q07973 514 aa27.24■■□□□ 1.95
PVT1-201ENST00000504719 PSMD6Q15008 389 aa27.24■■□□□ 1.95
PVT1-201ENST00000504719 TEAD2Q15562 447 aa27.24■■□□□ 1.95
PVT1-201ENST00000504719 MGAT5BQ3V5L5 792 aa27.24■■□□□ 1.95
PVT1-201ENST00000504719 TOP6BLQ8N6T0 577 aa27.24■■□□□ 1.95
PVT1-201ENST00000504719 SPATA18Q8TC71 538 aa27.24■■□□□ 1.95
PVT1-201ENST00000504719 SEPT5Q99719 369 aaPredicted RBP27.24■■□□□ 1.95
PVT1-201ENST00000504719 ZFP14Q9HCL3 533 aa27.24■■□□□ 1.95
PVT1-201ENST00000504719 R3HCC1Q9Y3T6 440 aaKnown RBP27.24■■□□□ 1.95
PVT1-201ENST00000504719 HAPLN1P10915 354 aaPredicted RBP27.23■■□□□ 1.95
PVT1-201ENST00000504719 TSPY1Q01534 308 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 MYO1EQ12965 1108 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 PNOCQ13519 176 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 TRAPPC11Q7Z392 1133 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 ITIH5Q86UX2 942 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 OSTM1Q86WC4 334 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 TIGD1Q96MW7 591 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 CGRRF1Q99675 332 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 ACBD6Q9BR61 282 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 GPR88Q9GZN0 384 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 IRF2BPLQ9H1B7 796 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 ZNF334Q9HCZ1 680 aaPredicted RBP27.23■■□□□ 1.95
PVT1-201ENST00000504719 TMLHEQ9NVH6 421 aa27.23■■□□□ 1.95
PVT1-201ENST00000504719 DDX43Q9NXZ2 648 aaKnown RBP27.23■■□□□ 1.95
PVT1-201ENST00000504719 A0A1W2PRU2 124 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 RHOBTB3O94955 611 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 DLATP10515 647 aaKnown RBP27.22■■□□□ 1.95
PVT1-201ENST00000504719 ATF6P18850 670 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 RFX1P22670 979 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 STARD6P59095 220 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 MYL7Q01449 175 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 PFKPQ01813 784 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 LIMS2Q7Z4I7 341 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 SMARCD2Q92925 531 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 HPDLQ96IR7 371 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 FNBP1Q96RU3 617 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 LPIN3Q9BQK8 851 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 ABI2Q9NYB9 513 aaPredicted RBP27.22■■□□□ 1.95
PVT1-201ENST00000504719 PCDHB5Q9Y5E4 795 aa27.22■■□□□ 1.95
PVT1-201ENST00000504719 PRPF40AO75400 957 aaKnown RBP27.21■■□□□ 1.95
PVT1-201ENST00000504719 TNNI1P19237 187 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 SOWAHAQ2M3V2 549 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 SLC44A4Q53GD3 710 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 GAREM2Q75VX8 874 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 DPH6Q7L8W6 267 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 ALYREFQ86V81 257 aaKnown RBP27.21■■□□□ 1.95
PVT1-201ENST00000504719 CCDC105Q8IYK2 499 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 GOLGA5Q8TBA6 731 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 ZSCAN18Q8TBC5 510 aaPredicted RBP27.21■■□□□ 1.95
PVT1-201ENST00000504719 SHDQ96IW2 340 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 TRPV4Q9HBA0 871 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 DENND4CQ5VZ89 1909 aa27.21■■□□□ 1.95
PVT1-201ENST00000504719 H0Y858 1186 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 GABRDO14764 452 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 FGF19O95750 216 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 LHX1P48742 406 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 PRKCQQ04759 706 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 KCNB1Q14721 858 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 VEPH1Q14D04 833 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 MLF2Q15773 248 aaPredicted RBP27.2■■□□□ 1.94
PVT1-201ENST00000504719 NFE2Q16621 373 aaPredicted RBP27.2■■□□□ 1.94
PVT1-201ENST00000504719 INTS6LQ5JSJ4 861 aaKnown RBP27.2■■□□□ 1.94
PVT1-201ENST00000504719 ADGRF2Q8IZF7 708 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 FAM200AQ8TCP9 573 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 CCDC127Q96BQ5 260 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 PHOX2BQ99453 314 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 GZF1Q9H116 711 aaPredicted RBP27.2■■□□□ 1.94
PVT1-201ENST00000504719 MIA3Q5JRA6 1907 aa27.2■■□□□ 1.94
PVT1-201ENST00000504719 NUP210Q8TEM1 1887 aaPredicted RBP27.19■■□□□ 1.94
PVT1-201ENST00000504719 EXOC3O60645 756 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 KINO60870 393 aaKnown RBP27.19■■□□□ 1.94
PVT1-201ENST00000504719 CST3P01034 146 aaPredicted RBP27.19■■□□□ 1.94
PVT1-201ENST00000504719 ACAT1P24752 427 aaKnown RBP27.19■■□□□ 1.94
PVT1-201ENST00000504719 UBE2HP62256 183 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 DTWD2Q8NBA8 298 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 GIPC2Q8TF65 315 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 TMEM174Q8WUU8 243 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 ZNF516Q92618 1163 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 PKMYT1Q99640 499 aa27.19■■□□□ 1.94
PVT1-201ENST00000504719 DDX23Q9BUQ8 820 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms