RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FGFR3P22607 806 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 THPOP40225 353 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 GARSP41250 739 aaKnown RBP5.65□□□□□ -1.5
NIPBL-204ENST00000504430 BOLA3Q53S33 107 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 CAVIN4Q5BKX8 364 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 NAA16Q6N069 864 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-204ENST00000504430 CNKSR3Q6P9H4 555 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 HEATR3Q7Z4Q2 680 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 CPLX4Q7Z7G2 160 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 TSPYL6Q8N831 410 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 JPH1Q9HDC5 661 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-204ENST00000504430 SQORQ9Y6N5 450 aa5.65□□□□□ -1.5
NIPBL-204ENST00000504430 SOS2Q07890 1332 aaPredicted RBP5.65□□□□□ -1.51
NIPBL-204ENST00000504430 A8MVJ9 347 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 KIF2AO00139 706 aaPredicted RBP5.65□□□□□ -1.51
NIPBL-204ENST00000504430 TM4SF5O14894 197 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 PRPSAP2O60256 369 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 FGFR1OPO95684 399 aaKnown RBP5.65□□□□□ -1.51
NIPBL-204ENST00000504430 SCG2P13521 617 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 HOXA11P31270 313 aaPredicted RBP5.65□□□□□ -1.51
NIPBL-204ENST00000504430 NR0B2Q15466 257 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 ZNF827Q17R98 1081 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 RSPO2Q6UXX9 243 aaPredicted RBP5.65□□□□□ -1.51
NIPBL-204ENST00000504430 UNC45BQ8IWX7 931 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 PDCL2Q8N4E4 241 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 IQCDQ96DY2 449 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 LZTS2Q9BRK4 669 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 PACSIN1Q9BY11 444 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 SLC25A18Q9H1K4 315 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 SNTG1Q9NSN8 517 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 UBAP1Q9NZ09 502 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 LMTK3Q96Q04 1460 aa5.65□□□□□ -1.51
NIPBL-204ENST00000504430 GSTA4O15217 222 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 DYNC1LI2O43237 492 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 FAM155BO75949 473 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TSPY4P0CV99 314 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TSPY10P0CW01 314 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 PCNAP12004 261 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 RPS2P15880 293 aaKnown RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CD40P25942 277 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 NNMTP40261 264 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 FLT3LGP49771 235 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 GPC3P51654 580 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 AP2B1P63010 937 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 LACTBP83111 547 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CALD1Q05682 793 aaKnown RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 PPP3CAQ08209 521 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TRIM28Q13263 835 aaKnown RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 PDCLQ13371 301 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 SNAPC2Q13487 334 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 NOMO1Q15155 1222 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 ARHGAP44Q17R89 818 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 BORAQ6PGQ7 559 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 KLHL17Q6TDP4 642 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 DYMQ7RTS9 669 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 FAM71BQ8TC56 605 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TEKT1Q969V4 418 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CEP295NLQ96MC4 621 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 LENG8Q96PV6 779 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 NEK1Q96PY6 1258 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TWNKQ96RR1 684 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CRACR2AQ9BSW2 395 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 MYO1AQ9UBC5 1043 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 FBLN5Q9UBX5 448 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CORO1CQ9ULV4 474 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TELO2Q9Y4R8 837 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 IRS2Q9Y4H2 1338 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 AFPP02771 609 aaKnown RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 GSTM1P09488 218 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 NR2F1P10589 423 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 MED22Q15528 200 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 KRBOX4Q5JUW0 171 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 HHIPL2Q6UWX4 724 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CRELD2Q6UXH1 353 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 IKBIPQ70UQ0 350 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TAX1BP1Q86VP1 789 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CYP4X1Q8N118 509 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 FBXO15Q8NCQ5 510 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 FBXO30Q8TB52 745 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 HSPH1Q92598 858 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CHFRQ96EP1 664 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 DMRTA2Q96SC8 542 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 AGAP2Q99490 1192 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 ADPRHL2Q9NX46 363 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 GULP1Q9UBP9 304 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 HS3ST4Q9Y661 456 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 M0QX08 132 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 MYO1BO43795 1136 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TSPAN3O60637 253 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 TPOP07202 933 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 CHMP24386 653 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 RFC1P35251 1148 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 HARS2P49590 506 aaKnown RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 DIO1P49895 249 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 SLC5A3P53794 718 aa5.64□□□□□ -1.51
NIPBL-204ENST00000504430 MRPS5P82675 430 aaKnown RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 YWHAHQ04917 246 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 EXOSC9Q06265 439 aaKnown RBP5.64□□□□□ -1.51
NIPBL-204ENST00000504430 BTBD16Q32M84 506 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms