RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 NELFBQ8WX92 580 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 E2F7Q96AV8 911 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 APOL5Q9BWW9 433 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 POMKQ9H5K3 350 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 CYP3A43Q9HB55 503 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 RTN4Q9NQC3 1192 aaKnown RBP8.35□□□□□ -1.07
SKP2-203ENST00000504386 GDE1Q9NZC3 331 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 UXTQ9UBK9 157 aaPredicted RBP8.35□□□□□ -1.07
SKP2-203ENST00000504386 SIX4Q9UIU6 781 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 L1RE1Q9UN81 338 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 TIMM13Q9Y5L4 95 aaPredicted RBP8.35□□□□□ -1.07
SKP2-203ENST00000504386 CHD9Q3L8U1 2897 aa8.35□□□□□ -1.07
SKP2-203ENST00000504386 TRIP11Q15643 1979 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 MTMR11A4FU01 709 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 SOBPA7XYQ1 873 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 GABRDO14764 452 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 TRIM66O15016 1216 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 PMM2O15305 246 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 CCL16O15467 120 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 RFPL2O75678 378 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 C4BPAP04003 597 aaKnown RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 CSH1P0DML2 217 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 CSH2P0DML3 217 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 CHRM1P11229 460 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 TBXAS1P24557 533 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 ANXA13P27216 316 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 ERCC5P28715 1186 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 CDC25CP30307 473 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 GNL1P36915 607 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 MAGEA11P43364 429 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 CASP4P49662 377 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 PDE6CP51160 858 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 MCCD1P59942 119 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 TWF1Q12792 350 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 SOWAHAQ2M3V2 549 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 MGAT5BQ3V5L5 792 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 CFAP221Q4G0U5 840 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 SLC39A12Q504Y0 691 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 ARHGAP15Q53QZ3 475 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 TCERG1LQ5VWI1 586 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 LMBRD2Q68DH5 695 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 ANKRD40Q6AI12 368 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 KLHL10Q6JEL2 608 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 VSTM1Q6UX27 236 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 RNF19BQ6ZMZ0 732 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 LIMS2Q7Z4I7 341 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 SPATA2LQ8IUW3 424 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 ZC3H3Q8IXZ2 948 aaKnown RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 SMYD4Q8IYR2 804 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 FBXL13Q8NEE6 735 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 ZSWIM2Q8NEG5 633 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 OR6B3Q8NGW1 331 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 CXorf38Q8TB03 319 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 FAM200AQ8TCP9 573 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 ZNF707Q96C28 371 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 BORCS6Q96GS4 357 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 FAM81BQ96LP2 452 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 EPS15L1Q9UBC2 864 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 RWDD2AQ9UIY3 292 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 CDH7Q9ULB5 785 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 MRPS23Q9Y3D9 190 aaKnown RBP8.34□□□□□ -1.07
SKP2-203ENST00000504386 YIPF1Q9Y548 306 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 ATG2AQ2TAZ0 1938 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 NCOR1O75376 2440 aa8.34□□□□□ -1.07
SKP2-203ENST00000504386 A8MXQ7 604 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 PI4K2BG5E9Z4 385 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 BIN1O00499 593 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 ADAM12O43184 909 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 ASS1P00966 412 aaKnown RBP8.33□□□□□ -1.08
SKP2-203ENST00000504386 TPM2P07951 284 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 RHOP08100 348 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 PPP3CCP48454 512 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 WNT7BP56706 349 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 MYL6P60660 151 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 NOP14P78316 857 aaKnown RBP8.33□□□□□ -1.08
SKP2-203ENST00000504386 DUSP4Q13115 394 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 CAMK4Q16566 473 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 PTPN21Q16825 1174 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 DCAF17Q5H9S7 520 aaPredicted RBP8.33□□□□□ -1.08
SKP2-203ENST00000504386 TDRD10Q5VZ19 366 aaKnown RBP8.33□□□□□ -1.08
SKP2-203ENST00000504386 RSPO2Q6UXX9 243 aaPredicted RBP8.33□□□□□ -1.08
SKP2-203ENST00000504386 GRASPQ7Z6J2 395 aaPredicted RBP8.33□□□□□ -1.08
SKP2-203ENST00000504386 RNF135Q8IUD6 432 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 OR10T2Q8NGX3 314 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 PSMG2Q969U7 264 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 PGLYRP2Q96PD5 576 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 SEPT5Q99719 369 aaPredicted RBP8.33□□□□□ -1.08
SKP2-203ENST00000504386 SYT15Q9BQS2 421 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 ELOVL4Q9GZR5 314 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 NIF3L1Q9GZT8 377 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 XYLT2Q9H1B5 865 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 LMBRD1Q9NUN5 540 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 ABI2Q9NYB9 513 aaPredicted RBP8.33□□□□□ -1.08
SKP2-203ENST00000504386 SORCS3Q9UPU3 1222 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 CTNND2Q9UQB3 1225 aa8.33□□□□□ -1.08
SKP2-203ENST00000504386 TTC28Q96AY4 2481 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 PTPRJQ12913 1337 aa8.32□□□□□ -1.08
SKP2-203ENST00000504386 C2CD4DB7Z1M9 353 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms