RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 CAPSQ13938 189 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 PPP2R5DQ14738 602 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 TEAD2Q15562 447 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 COL28A1Q2UY09 1125 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 XKR3Q5GH77 459 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 CREB3L3Q68CJ9 461 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 NCAPH2Q6IBW4 605 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 NOTUMQ6P988 496 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 CYP26C1Q6V0L0 522 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 PDZD4Q76G19 769 aaPredicted RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 ARMCX6Q7L4S7 300 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 MRPL10Q7Z7H8 261 aaKnown RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 FAM35AQ86V20 835 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 LONP2Q86WA8 852 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 ZDHHC13Q8IUH4 622 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 SMC5Q8IY18 1101 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 C3orf58Q8NDZ4 430 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 STKLD1Q8NE28 680 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 GSTCDQ8NEC7 633 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 TTC16Q8NEE8 873 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 LNX1Q8TBB1 728 aaPredicted RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 ZSCAN18Q8TBC5 510 aaPredicted RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 FAM200AQ8TCP9 573 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 PRPF31Q8WWY3 499 aaKnown RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 PIK3R5Q8WYR1 880 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 TTC9Q92623 222 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 DNASE1L2Q92874 299 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 SLC5A5Q92911 643 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 CRELD1Q96HD1 420 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 TMEM87BQ96K49 555 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 ASB16Q96NS5 453 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 BBC3Q96PG8 261 aaPredicted RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 MAP3K14Q99558 947 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 TTPALQ9BTX7 342 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 KIFC3Q9BVG8 833 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 TRMT61BQ9BVS5 477 aaKnown RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 TRAIPQ9BWF2 469 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 COLEC11Q9BWP8 271 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 OSBPL6Q9BZF3 934 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 TPSD1Q9BZJ3 242 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 MRPL18Q9H0U6 180 aaKnown RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 SMG9Q9H0W8 520 aaKnown RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 GDPD2Q9HCC8 539 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 NCOA5Q9HCD5 579 aaKnown RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 ZNF334Q9HCZ1 680 aaPredicted RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 GPRC5CQ9NQ84 441 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 ANO2Q9NQ90 1003 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 XPNPEP1Q9NQW7 623 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.02□□□□□ -1.77
USP46-205ENST00000504078 NRBP2Q9NSY0 501 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 TBC1D22BQ9NU19 505 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 FRRS1LQ9P0K9 344 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 FNIP2Q9P278 1114 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 STOML1Q9UBI4 398 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 DPP7Q9UHL4 492 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 NAGPAQ9UK23 515 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 SSX2IPQ9Y2D8 614 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 GDAQ9Y2T3 454 aa4.02□□□□□ -1.77
USP46-205ENST00000504078 RBM19Q9Y4C8 960 aaKnown RBP4.02□□□□□ -1.77
USP46-205ENST00000504078 KIAA1549LQ6ZVL6 1849 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 LNP1A1A4G5 178 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 ANTXRLA6NF34 631 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 LRRIQ4A6NIV6 560 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 SPECC1L-ADORA2AF8WAN1 911 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 PYCARD-AS1I3L0S3 204 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 TM4SF5O14894 197 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 ZNF263O14978 683 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 LRP3O75074 770 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 MOSPD3O75425 235 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 PSMD10O75832 226 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 SOAT2O75908 522 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 SEC24AO95486 1093 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 PRAMEF12O95522 483 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 CYP3A4P08684 503 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 OR4Q2P0C623 313 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 HARSP12081 509 aaKnown RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 NFKB1P19838 968 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 BCKDHBP21953 392 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 SMARCA1P28370 1054 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 HOXA9P31269 272 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 SFNP31947 248 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 GBP1P32455 592 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 ATP1A2P50993 1020 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 LIMK1P53667 647 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 NRLP54845 237 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 CYP4F8P98187 520 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 CREMQ03060 361 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 TWF1Q12792 350 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 TUSC3Q13454 348 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 NCOA4Q13772 614 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 CCINQ13939 588 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 CTTNQ14247 550 aaKnown RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 LRRC32Q14392 662 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 PFKFB3Q16875 520 aaPredicted RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 ADCK5Q3MIX3 580 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 SOWAHCQ53LP3 525 aaPredicted RBP4.01□□□□□ -1.77
USP46-205ENST00000504078 XKR9Q5GH70 373 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 EEF1DP3Q658K8 133 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 LRSAM1Q6UWE0 723 aa4.01□□□□□ -1.77
USP46-205ENST00000504078 SYNE3Q6ZMZ3 975 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms