RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TMEM176AQ96HP8 235 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 ZNF560Q96MR9 790 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 FTHL17Q9BXU8 183 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 GOLPH3Q9H4A6 298 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 FAM124BQ9H5Z6 455 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 L2HGDHQ9H9P8 463 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 SLC38A7Q9NVC3 462 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 TMEM161AQ9NX61 479 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 MYO1AQ9UBC5 1043 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 TJP2Q9UDY2 1190 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.35□□□□□ -1.23
TOPBP1-203ENST00000503464 I3L4J1 428 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 ENC1O14682 589 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 GABRDO14764 452 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 KIAA0355O15063 1070 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 NCK2O43639 380 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TACC1O75410 805 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 PALMO75781 387 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 MICAL2O94851 1124 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 KIF4AO95239 1232 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TUBB4AP04350 444 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 CYP1A2P05177 515 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 PFKMP08237 780 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 P4HA1P13674 534 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 EN2P19622 333 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 MMP8P22894 467 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 WARSP23381 471 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 RRM1P23921 792 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 LMO2P25791 158 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TKTP29401 623 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 RPL9P32969 192 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 PNPLA4P41247 253 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 HADHBP55084 474 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 YWHAEP62258 255 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TUSC3Q13454 348 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 SV2CQ496J9 727 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 PTPN20Q4JDL3 420 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 PAN2Q504Q3 1202 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 PKDCCQ504Y2 493 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TIGD5Q53EQ6 642 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 NOMO2Q5JPE7 1267 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 DNTTIP2Q5QJE6 756 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 IER5LQ5T953 404 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 WSCD1Q658N2 575 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TRIM72Q6ZMU5 477 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 MMS22LQ6ZRQ5 1243 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 DEFB128Q7Z7B8 93 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 SLFN11Q7Z7L1 901 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 ACOT1Q86TX2 421 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 PHF13Q86YI8 300 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 COLGALT2Q8IYK4 626 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 ADGRF2Q8IZF7 708 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 MCOLN2Q8IZK6 566 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TOP6BLQ8N6T0 577 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 C12orf29Q8N999 325 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 KIF18AQ8NI77 898 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 SLC35G2Q8TBE7 412 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 RFFLQ8WZ73 363 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 APBB2Q92870 758 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 ZNF653Q96CK0 615 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 SENP8Q96LD8 212 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 CASD1Q96PB1 797 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 MMS19Q96T76 1030 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 RTP3Q9BQQ7 232 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TLR10Q9BXR5 811 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TRIM7Q9C029 511 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 ELAC1Q9H777 363 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 UBN1Q9NPG3 1134 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 TBC1D13Q9NVG8 400 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 DNAJB4Q9UDY4 337 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 PUF60Q9UHX1 559 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 GTF3C4Q9UKN8 822 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 STXBP5LQ9Y2K9 1186 aa7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 COL4A4P53420 1690 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-203ENST00000503464 M0QZQ0 153 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 TULP2O00295 520 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 CYB561D2O14569 222 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 RIOK3O14730 519 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 BUB1BO60566 1050 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 ATP2C2O75185 946 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 MTA2O94776 668 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 GJB6O95452 261 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 LSM8O95777 96 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 FTCDO95954 541 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 VDRP11473 427 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 CD19P15391 556 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 ACAT1P24752 427 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 CASQ1P31415 396 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 BRCC3P46736 316 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 GPC5P78333 572 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 CNGA2Q16280 664 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 PPP1R26Q5T8A7 1209 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 PAPD7Q5XG87 772 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 ARHGAP17Q68EM7 881 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 LCLAT1Q6UWP7 414 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 GLB1LQ6UWU2 654 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 PHLDB2Q86SQ0 1253 aa7.33□□□□□ -1.24
TOPBP1-203ENST00000503464 UNC93AQ86WB7 457 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms