RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 C2orf15Q8WU43 125 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-209ENST00000503346 PKMYT1Q99640 499 aa19.53■□□□□ 0.72
PDLIM7-209ENST00000503346 CRISPLD1Q9H336 500 aa19.53■□□□□ 0.72
PDLIM7-209ENST00000503346 NXF1Q9UBU9 619 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-209ENST00000503346 YIPF1Q9Y548 306 aa19.53■□□□□ 0.72
PDLIM7-209ENST00000503346 TNFRSF10AO00220 468 aa19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 PIK3CAP42336 1068 aa19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 ZNF667Q5HYK9 610 aa19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 RBM43Q6ZSC3 357 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 GRASPQ7Z6J2 395 aaPredicted RBP19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 SPPL2BQ8TCT7 592 aa19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 TAS1R2Q8TE23 839 aa19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 MRPL45Q9BRJ2 306 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 POLIQ9UNA4 740 aa19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 TTC28Q96AY4 2481 aa19.52■□□□□ 0.72
PDLIM7-209ENST00000503346 MTCL1Q9Y4B5 1905 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 GNA14O95837 355 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 P4HA1P13674 534 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 ACAT1P24752 427 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 MXI1P50539 228 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 NLRP12P59046 1061 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 TWF1Q12792 350 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 PLD1Q13393 1074 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 NFE2Q16621 373 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 DCAF17Q5H9S7 520 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 OTOP3Q7RTS5 596 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 TDRD5Q8NAT2 981 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 SLC35C1Q96A29 364 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 MED15Q96RN5 788 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 MMRN2Q9H8L6 949 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 TMLHEQ9NVH6 421 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 DNMT3BQ9UBC3 853 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 CDH9Q9ULB4 789 aa19.51■□□□□ 0.71
PDLIM7-209ENST00000503346 C5orf42Q9H799 3197 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 C2CD4DB7Z1M9 353 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 HCRTO43612 131 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 FGFR1OPO95684 399 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 LMO2P25791 158 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 GNL1P36915 607 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 TUFMP49411 452 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 MARSP56192 900 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 DPCR1Q3MIW9 517 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 CCDC40Q4G0X9 1142 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 TCERG1LQ5VWI1 586 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 FAM171BQ6P995 826 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 ZDHHC14Q8IZN3 488 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 TTC9BQ8N6N2 239 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 ACSF2Q96CM8 615 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 SYT15Q9BQS2 421 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 SRRTQ9BXP5 876 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 IMPG2Q9BZV3 1241 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 SNX25Q9H3E2 840 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 SMYD3Q9H7B4 428 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 AVENQ9NQS1 362 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 SLC27A5Q9Y2P5 690 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 NME7Q9Y5B8 376 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 PCDHB5Q9Y5E4 795 aa19.5■□□□□ 0.71
PDLIM7-209ENST00000503346 MYBPHLA2RUH7 354 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 PTPN2P17706 415 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 SP100P23497 879 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 FSHRP23945 695 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 NOP14P78316 857 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 NTHL1P78549 312 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 CBWD6Q4V339 395 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 CBWD3Q5JTY5 395 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 CBWD5Q5RIA9 395 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 SPOPLQ6IQ16 392 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 ELMOD1Q8N336 334 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 PLCD3Q8N3E9 789 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 FBXL13Q8NEE6 735 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 OR6B3Q8NGW1 331 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 ELMO3Q96BJ8 720 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 PI4K2AQ9BTU6 479 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 APOBEC3GQ9HC16 384 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 ABCB6Q9NP58 842 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 HCFC1R1Q9NWW0 138 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 ABI2Q9NYB9 513 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 CEP72Q9P209 647 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 DACH1Q9UI36 760 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 GTF3C4Q9UKN8 822 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 COQ4Q9Y3A0 265 aa19.49■□□□□ 0.71
PDLIM7-209ENST00000503346 PMM2O15305 246 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 N4BP1O75113 896 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 CLSTN1O94985 981 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 RHOP08100 348 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 PDGFRBP09619 1106 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 HAPLN1P10915 354 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 ERCC5P28715 1186 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 ASPAP45381 313 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 ALDH1A3P47895 512 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 EPHB3P54753 998 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 MAPRE1Q15691 268 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 MGAT5BQ3V5L5 792 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 PABPC1LQ4VXU2 614 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 CT47A1Q5JQC4 288 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 IQCEQ6IPM2 695 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 RNF135Q8IUD6 432 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 TRIM59Q8IWR1 403 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 CCDC150Q8NCX0 1101 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 SEMA4DQ92854 862 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms