RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 PCDHGA3Q9Y5H0 932 aa4.61□□□□□ -1.67
GYPB-203ENST00000503255 SPATA31A3Q5VYP0 1347 aa4.61□□□□□ -1.67
GYPB-203ENST00000503255 PRRT4C9JH25 899 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 PPEF2O14830 753 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 JTBO76095 146 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 KIF20AO95235 890 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 TOP3BO95985 862 aaKnown RBP4.6□□□□□ -1.67
GYPB-203ENST00000503255 MT-CO1P00395 513 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 GJB1P08034 283 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 MALP21145 153 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 ARHGAP25P42331 645 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 ZNF135P52742 658 aaPredicted RBP4.6□□□□□ -1.67
GYPB-203ENST00000503255 BOP1Q14137 746 aaKnown RBP4.6□□□□□ -1.67
GYPB-203ENST00000503255 HABP2Q14520 560 aaPredicted RBP4.6□□□□□ -1.67
GYPB-203ENST00000503255 RAB39AQ14964 217 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 PLAC9Q5JTB6 97 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 CEP85Q6P2H3 762 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 ZNF551Q7Z340 670 aaPredicted RBP4.6□□□□□ -1.67
GYPB-203ENST00000503255 AOPEPQ8N6M6 819 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 OSBPL9Q96SU4 736 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 C1orf43Q9BWL3 253 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 BRD9Q9H8M2 597 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 MKS1Q9NXB0 559 aa4.6□□□□□ -1.67
GYPB-203ENST00000503255 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.6□□□□□ -1.67
GYPB-203ENST00000503255 SMIM35A0A1B0GVV1 85 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 TRIM75PA6NK02 468 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 SGTAO43765 313 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 HOXB6P17509 224 aaKnown RBP4.59□□□□□ -1.67
GYPB-203ENST00000503255 NCLP19338 710 aaKnown RBP4.59□□□□□ -1.67
GYPB-203ENST00000503255 CYP2C18P33260 490 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 LIPAP38571 399 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 KIF23Q02241 960 aaPredicted RBP4.59□□□□□ -1.67
GYPB-203ENST00000503255 RABEP1Q15276 862 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 RNF219Q5W0B1 726 aaPredicted RBP4.59□□□□□ -1.67
GYPB-203ENST00000503255 RUSC1-AS1Q66K80 236 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 NAPRTQ6XQN6 538 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 PHLDB1Q86UU1 1377 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 CBARPQ8N350 705 aaPredicted RBP4.59□□□□□ -1.67
GYPB-203ENST00000503255 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.59□□□□□ -1.67
GYPB-203ENST00000503255 CNTD1Q8N815 330 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 C1orf162Q8NEQ5 155 aaPredicted RBP4.59□□□□□ -1.67
GYPB-203ENST00000503255 SCAMP4Q969E2 229 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 FAM136AQ96C01 138 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 SEMA4CQ9C0C4 833 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 ANLNQ9NQW6 1124 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 DLL3Q9NYJ7 618 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 SERPINB13Q9UIV8 391 aa4.59□□□□□ -1.67
GYPB-203ENST00000503255 H0YIZ8 118 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 K7ESF4 209 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 CPEP16870 476 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 CERS1P27544 350 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 CD6P30203 668 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 CLCN2P51788 898 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 INAVAQ3KP66 663 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 ZNF260Q3ZCT1 412 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 SLC29A4Q7RTT9 530 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 MAVSQ7Z434 540 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 CHSY1Q86X52 802 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 CNGA4Q8IV77 575 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 COA7Q96BR5 231 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 FAXDC2Q96IV6 333 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 C5orf34Q96MH7 638 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 PDGFCQ9NRA1 345 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 CALCOCO1Q9P1Z2 691 aa4.58□□□□□ -1.68
GYPB-203ENST00000503255 NT5C1B-RDH14C9J2C7 533 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 DNAJB5O75953 348 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 ANXA1P04083 346 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 TUBB4AP04350 444 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 ENGP17813 658 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 ITGALP20701 1170 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 NR4A2P43354 598 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 ALDH9A1P49189 494 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 CCT4P50991 539 aaKnown RBP4.57□□□□□ -1.68
GYPB-203ENST00000503255 SLC16A1P53985 500 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 FOXG1P55316 489 aaPredicted RBP4.57□□□□□ -1.68
GYPB-203ENST00000503255 EEFSECP57772 596 aaKnown RBP4.57□□□□□ -1.68
GYPB-203ENST00000503255 CYP4F2P78329 520 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 DSC2Q02487 901 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 KLHL22Q53GT1 634 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 PCID2Q5JVF3 399 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 SLC4A10Q6U841 1118 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 PDSS2Q86YH6 399 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 FAM177A1Q8N128 213 aaPredicted RBP4.57□□□□□ -1.68
GYPB-203ENST00000503255 PNLDC1Q8NA58 520 aaKnown RBP4.57□□□□□ -1.68
GYPB-203ENST00000503255 VPS16Q9H269 839 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 SPC25Q9HBM1 224 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 RAD54BQ9Y620 910 aa4.57□□□□□ -1.68
GYPB-203ENST00000503255 KLHL33A6NCF5 533 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 QSOX1O00391 747 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 XPOTO43592 962 aaKnown RBP4.56□□□□□ -1.68
GYPB-203ENST00000503255 MMP13P45452 471 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
GYPB-203ENST00000503255 PCBP2Q15366 365 aaKnown RBP eCLIP4.56□□□□□ -1.68
GYPB-203ENST00000503255 TREML2Q5T2D2 321 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 TMEM108Q6UXF1 575 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 ZNF517Q6ZMY9 492 aaPredicted RBP4.56□□□□□ -1.68
GYPB-203ENST00000503255 CATSPERGQ6ZRH7 1159 aa4.56□□□□□ -1.68
GYPB-203ENST00000503255 KRT26Q7Z3Y9 468 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms