RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 CASP4P49662 377 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 UBE2HP62256 183 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 NTHL1P78549 312 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 TWF1Q12792 350 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 DUSP4Q13115 394 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 HTR4Q13639 388 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 MAPRE1Q15691 268 aaKnown RBP9.42□□□□□ -0.9
RNF4-203ENST00000503123 SOWAHAQ2M3V2 549 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 SLC39A12Q504Y0 691 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 PRSS36Q5K4E3 855 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 CYP4A22Q5TCH4 519 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 FOXR2Q6PJQ5 311 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 CLEC17AQ6ZS10 378 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
RNF4-203ENST00000503123 ITIH5Q86UX2 942 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 ADGRF2Q8IZF7 708 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 ZNF516Q92618 1163 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 PSMG2Q969U7 264 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 ASIC4Q96FT7 647 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 FUBP3Q96I24 572 aaKnown RBP eCLIP9.42□□□□□ -0.9
RNF4-203ENST00000503123 PGLYRP2Q96PD5 576 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 PKMYT1Q99640 499 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 XYLT2Q9H1B5 865 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 ASAH2Q9NR71 780 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 DDX43Q9NXZ2 648 aaKnown RBP9.42□□□□□ -0.9
RNF4-203ENST00000503123 CEP72Q9P209 647 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 DUSP12Q9UNI6 340 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 MRPS23Q9Y3D9 190 aaKnown RBP9.42□□□□□ -0.9
RNF4-203ENST00000503123 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
RNF4-203ENST00000503123 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
RNF4-203ENST00000503123 ATG2BQ96BY7 2078 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 FAM86C2PA6NEL3 165 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 TMEM221A6NGB7 291 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 M0R296 226 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 CST3P01034 146 aaPredicted RBP9.41□□□□□ -0.9
RNF4-203ENST00000503123 C4BPAP04003 597 aaKnown RBP9.41□□□□□ -0.9
RNF4-203ENST00000503123 ASGR2P07307 311 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 WARSP23381 471 aaKnown RBP9.41□□□□□ -0.9
RNF4-203ENST00000503123 PSMC2P35998 433 aaKnown RBP9.41□□□□□ -0.9
RNF4-203ENST00000503123 PRCPP42785 496 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 TNNC1P63316 161 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 LRRC63Q05C16 580 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 ADAM9Q13443 819 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 TRPC3Q13507 836 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 STIM1Q13586 685 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 SLC5A9Q2M3M2 681 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 ZACNQ401N2 412 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 CFAP221Q4G0U5 840 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
RNF4-203ENST00000503123 TDRD10Q5VZ19 366 aaKnown RBP9.41□□□□□ -0.9
RNF4-203ENST00000503123 CEP135Q66GS9 1140 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 SCARA3Q6AZY7 606 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 PDZD4Q76G19 769 aaPredicted RBP9.41□□□□□ -0.9
RNF4-203ENST00000503123 LRRTM3Q86VH5 581 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 NPAS3Q8IXF0 933 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 ZC3H3Q8IXZ2 948 aaKnown RBP9.41□□□□□ -0.9
RNF4-203ENST00000503123 ATAD1Q8NBU5 361 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 ITFG1Q8TB96 612 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 PLEKHO2Q8TD55 490 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 KBTBD7Q8WVZ9 684 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 TAF4BQ92750 862 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 FAM84AQ96KN4 292 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 CEP295NLQ96MC4 621 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 TMEM209Q96SK2 561 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 CORO1BQ9BR76 489 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 GPR88Q9GZN0 384 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 DNAJC25Q9H1X3 360 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 CRISPLD1Q9H336 500 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 CDH9Q9ULB4 789 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 MAPK8IP1Q9UQF2 711 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 PCDHB5Q9Y5E4 795 aa9.41□□□□□ -0.9
RNF4-203ENST00000503123 MYO18AQ92614 2054 aaKnown RBP9.4□□□□□ -0.9
RNF4-203ENST00000503123 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
RNF4-203ENST00000503123 PSMA7O14818 248 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 SLC16A3O15427 465 aaKnown RBP9.4□□□□□ -0.9
RNF4-203ENST00000503123 PHACTR2O75167 634 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 AKAP3O75969 853 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 HAPLN1P10915 354 aaPredicted RBP9.4□□□□□ -0.9
RNF4-203ENST00000503123 SRFP11831 508 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 KRT13P13646 458 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 GTF2H1P32780 548 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 VAMP7P51809 220 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 MYL6P60660 151 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 BIRC3Q13489 604 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 NCOA4Q13772 614 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 VEPH1Q14D04 833 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 SGSM1Q2NKQ1 1148 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 WDR72Q3MJ13 1102 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 C1orf220Q5T0J3 134 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 FAM171BQ6P995 826 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 C4orf50Q6ZRC1 276 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 HFE2Q6ZVN8 426 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 TMC8Q8IU68 726 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 FAM186BQ8IYM0 893 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 SMYD4Q8IYR2 804 aaPredicted RBP9.4□□□□□ -0.9
RNF4-203ENST00000503123 ADSSL1Q8N142 457 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 SLC44A3Q8N4M1 653 aa9.4□□□□□ -0.9
RNF4-203ENST00000503123 TTC9BQ8N6N2 239 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms