RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 E9PLN8 166 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 RAB27BO00194 218 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 IPO5O00410 1097 aaKnown RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 CCP110O43303 1012 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 PYGLP06737 847 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 VIPR2P41587 438 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 CPT1AP50416 773 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 AFF3P51826 1226 aaKnown RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 MESP2Q0VG99 397 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 TBX2Q13207 712 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 ARHGEF7Q14155 803 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 SPTY2D1Q68D10 685 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 KIAA0408Q6ZU52 694 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 USP49Q70CQ1 688 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 KRT73Q86Y46 540 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 LINC01356Q8N9X3 169 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 PDPRQ8NCN5 879 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 NEIL1Q96FI4 390 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 VKORC1Q9BQB6 163 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 EIF2AK1Q9BQI3 630 aaKnown RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 CPPED1Q9BRF8 314 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 FAM167BQ9BTA0 163 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 DHX36Q9H2U1 1008 aaKnown RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 NELFAQ9H3P2 528 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 SPON1Q9HCB6 807 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 PDP2Q9P2J9 529 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 HESX1Q9UBX0 185 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 OAZ3Q9UMX2 235 aa6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 SMG5Q9UPR3 1016 aaKnown RBP6.21□□□□□ -1.42
HMGB1P3-201ENST00000502802 A0A1B0GVC2 190 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 EIF3FO00303 357 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 CDC14BO60729 498 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 TNFRSF6BO95407 300 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 TPH1P17752 444 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 EGR1P18146 543 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 GNAT2P19087 354 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 CR2P20023 1033 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 TAF12Q16514 161 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 MAPKAPK3Q16644 382 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 TIGD6Q17RP2 521 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 INSCQ1MX18 579 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 ARHGAP15Q53QZ3 475 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 PLAG1Q6DJT9 500 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 TANGO2Q6ICL3 276 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 MFSD5Q6N075 450 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 MZT2AQ6P582 158 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 MED25Q71SY5 747 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 GAS2L3Q86XJ1 694 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 TP53I13Q8NBR0 393 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 RNF169Q8NCN4 708 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 STT3BQ8TCJ2 826 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 SMCR8Q8TEV9 937 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 FAM84AQ96KN4 292 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 DPYSL5Q9BPU6 564 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 MESP1Q9BRJ9 268 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 KATNAL1Q9BW62 490 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 MRPS18AQ9NVS2 196 aaKnown RBP6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 SCAF8Q9UPN6 1271 aaKnown RBP6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 TBC1D30Q9Y2I9 924 aa6.2□□□□□ -1.42
HMGB1P3-201ENST00000502802 RRN3P2A6NIE6 340 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 DRGXA6NNA5 263 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 EPB41L2O43491 1005 aaKnown RBP6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 B4GALT3O60512 393 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 KRT1P04264 644 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 ITGB1P05556 798 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 CKBP12277 381 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 MGAT1P26572 445 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 POLE2P56282 527 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 DDX10Q13206 875 aaKnown RBP6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 IQCB1Q15051 598 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 CSRP2Q16527 193 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 PLA1AQ53H76 456 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 NOMO2Q5JPE7 1267 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 DRICH1Q6PGQ1 229 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 CRTC1Q6UUV9 634 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 GATAD2AQ86YP4 633 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 NAXEQ8NCW5 288 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 USP13Q92995 863 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 NELL2Q99435 816 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 PRPF18Q99633 342 aaKnown RBP6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 SMOQ99835 787 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 PCDHAC1Q9H158 963 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 ZHX3Q9H4I2 956 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 SEC61A2Q9H9S3 476 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 CD320Q9NPF0 282 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 MAP3K20Q9NYL2 800 aaKnown RBP6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 POGKQ9P215 609 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 DKK4Q9UBT3 224 aa6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 HERC5Q9UII4 1024 aaKnown RBP6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 ZMYND8Q9ULU4 1186 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P3-201ENST00000502802 H7C4K7 107 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 POLRMTO00411 1230 aaKnown RBP6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 ASNA1O43681 348 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 VPS4BO75351 444 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 PRSS23O95084 383 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 TAL1P17542 331 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 PIGFQ07326 219 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 SLFN5Q08AF3 891 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 SIM2Q14190 667 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms