RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CETN1Q12798 172 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 CBX2Q14781 532 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 STX1AQ16623 288 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 INTS6LQ5JSJ4 861 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 ATAT1Q5SQI0 421 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 FAM171BQ6P995 826 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 SASS6Q6UVJ0 657 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 UNC93AQ86WB7 457 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 TMEM130Q8N3G9 435 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 LEMD2Q8NC56 503 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 CCDC150Q8NCX0 1101 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 OR10T2Q8NGX3 314 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 TAS1R2Q8TE23 839 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 ZNF707Q96C28 371 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 BPIFA3Q9BQP9 254 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 PHF7Q9BWX1 381 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 SRRTQ9BXP5 876 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 RAB20Q9NX57 234 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 DDX43Q9NXZ2 648 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 TMEM63CQ9P1W3 806 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 USP15Q9Y4E8 981 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 ASB3Q9Y575 518 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 DENND4AQ7Z401 1863 aa11.49□□□□□ -0.57
UBE2D3-212ENST00000502563 MTMR11A4FU01 709 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 CSPG5O95196 566 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 CAVIN2O95810 425 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 TRIM49P0CI25 452 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 TRIM49CP0CI26 452 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 CPB1P15086 417 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 ELF1P32519 619 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 PIK3CAP42336 1068 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 ASPAP45381 313 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 GCLMP48507 274 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 FMO5P49326 533 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 EPHA5P54756 1037 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 NOP14P78316 857 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 RBM10P98175 930 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 PPM1LQ5SGD2 360 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 LLGL2Q6P1M3 1020 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 ADHFE1Q8IWW8 467 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 JAKMIP2Q96AA8 810 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 FAM81BQ96LP2 452 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 NIF3L1Q9GZT8 377 aa11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 WDR6Q9NNW5 1121 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 TIMM13Q9Y5L4 95 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 ZFP37Q9Y6Q3 630 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-212ENST00000502563 VCANP13611 3396 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 CCDC195A0A1B0GUA6 201 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 VNN2O95498 520 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 TRIM21P19474 475 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 TBXAS1P24557 533 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 EEF1GP26641 437 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 MAGEA11P43364 429 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 ADCY1Q08828 1119 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 CBWD6Q4V339 395 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 CBWD3Q5JTY5 395 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 CBWD5Q5RIA9 395 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 TCERG1LQ5VWI1 586 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 SCARA3Q6AZY7 606 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 VSTM1Q6UX27 236 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 C4orf50Q6ZRC1 276 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 IRF2BP1Q8IU81 584 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 CRYBG2Q8N1P7 616 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 SLC7A14Q8TBB6 771 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 EEF2KMTQ96G04 330 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 FAM84AQ96KN4 292 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 TNIP3Q96KP6 325 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 DNAI2Q9GZS0 605 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 ZMYM5Q9UJ78 669 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 INSL5Q9Y5Q6 135 aa11.47□□□□□ -0.57
UBE2D3-212ENST00000502563 SOBPA7XYQ1 873 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 LOC730098B7Z3J9 87 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 FGF19O95750 216 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 AFPP02771 609 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 GNL1P36915 607 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 KCNQ1P51787 676 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 STX17P56962 302 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 GCNT1Q02742 428 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 ZP2Q05996 745 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 KCNH2Q12809 1159 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 DCAF17Q5H9S7 520 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 WDR44Q5JSH3 913 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 RNF19BQ6ZMZ0 732 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 EP400NLQ6ZTU2 488 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 LRRTM3Q86VH5 581 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 OSTM1Q86WC4 334 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 LMO3Q8TAP4 145 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 MYCBPAPQ8TBZ2 947 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 SMG7Q92540 1137 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 CNOT6LQ96LI5 555 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 MMS19Q96T76 1030 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 FUCA2Q9BTY2 467 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 NAT10Q9H0A0 1025 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 CYP4F11Q9HBI6 524 aa11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 APOBEC3GQ9HC16 384 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-212ENST00000502563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms