RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 SERPINC1P01008 464 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 RPSAP08865 295 aaKnown RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 CCDC175P0C221 793 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 EPB41P11171 864 aaKnown RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 FGFR4P22455 802 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 PEX19P40855 299 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 PRPHP41219 470 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 ME1P48163 572 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 GPC5P78333 572 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 MYL5Q02045 173 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 SPEM2Q0P670 501 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 PPP2R5DQ14738 602 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 ANKRD1Q15327 319 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 E2F5Q15329 346 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 SWI5Q1ZZU3 235 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 NOMO2Q5JPE7 1267 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 ZBTB41Q5SVQ8 909 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 THEMIS2Q5TEJ8 643 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 ATL3Q6DD88 541 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 ADALQ6DHV7 355 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 CCNI2Q6ZMN8 369 aaPredicted RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 NFXL1Q6ZNB6 911 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 BZW1Q7L1Q6 419 aaKnown RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 HEATR3Q7Z4Q2 680 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 TMEFF1Q8IYR6 380 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 MAML2Q8IZL2 1156 aaPredicted RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 LRRC71Q8N4P6 559 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 TSEN2Q8NCE0 465 aaKnown RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 ST13P5Q8NFI4 369 aaPredicted RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 CMASQ8NFW8 434 aaPredicted RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 SNIP1Q8TAD8 396 aaKnown RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 URGCPQ8TCY9 931 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 NETO1Q8TDF5 533 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 AENQ8WTP8 325 aaKnown RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 LPPQ93052 612 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 ARL8AQ96BM9 186 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 PGBD4Q96DM1 585 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 SAAL1Q96ER3 474 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 MYADMQ96S97 322 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 SELENOOQ9BVL4 669 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 KLF16Q9BXK1 252 aaPredicted RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 INO80BQ9C086 356 aaPredicted RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 EBF2Q9HAK2 575 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 SENP2Q9HC62 589 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 AGO4Q9HCK5 861 aaKnown RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 BATF3Q9NR55 127 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 SLC2A4RGQ9NR83 387 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 CHST12Q9NRB3 414 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 TBC1D13Q9NVG8 400 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 ZNF358Q9NW07 568 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 GABBR1Q9UBS5 961 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 DNAJB4Q9UDY4 337 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 GGA2Q9UJY4 613 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 ANGPTL2Q9UKU9 493 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 NUMBLQ9Y6R0 609 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 MAP1BP46821 2468 aaKnown RBP4.84□□□□□ -1.63
MATR3-202ENST00000502422 ASPMQ8IZT6 3477 aa4.84□□□□□ -1.63
MATR3-202ENST00000502422 BAHCC1Q9P281 2608 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 TARSL2A2RTX5 802 aaKnown RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 KIF5CO60282 957 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 MGRN1O60291 552 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 PRMT3O60678 531 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 CSDE1O75534 798 aaKnown RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 RTN3O95197 1032 aaPredicted RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 FOSP01100 380 aaPredicted RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 PSAPP07602 524 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 DARSP14868 501 aaKnown RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 EZRP15311 586 aaKnown RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 ZNF18P17022 549 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 BMP6P22004 513 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 PSMA5P28066 241 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 PHKA2P46019 1235 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 SLC11A1P49279 550 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 CDC42EP1Q00587 391 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 PFKPQ01813 784 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 PRKCQQ04759 706 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 ITGB3BPQ13352 177 aaPredicted RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 DRP2Q13474 957 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 PDCD2Q16342 344 aaPredicted RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 OCLNQ16625 522 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 SLC44A4Q53GD3 710 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 EMC10Q5UCC4 262 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 EGFLAMQ63HQ2 1017 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 SPECC1LQ69YQ0 1117 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 BLOC1S2Q6QNY1 142 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 ZNF654Q8IZM8 581 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 CMTR1Q8N1G2 835 aaKnown RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 ZBTB44Q8NCP5 570 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 LINC00301Q8NCQ3 95 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 RASSF8Q8NHQ8 419 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 ZNF473Q8WTR7 871 aaKnown RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 SPACA7Q96KW9 195 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 NELL2Q99435 816 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 MAP3K14Q99558 947 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 NAPGQ99747 312 aaPredicted RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 MYL10Q9BUA6 226 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 NUP58Q9BVL2 599 aa4.84□□□□□ -1.64
MATR3-202ENST00000502422 GCOM2Q9BZD3 368 aaPredicted RBP4.84□□□□□ -1.64
MATR3-202ENST00000502422 CENPHQ9H3R5 247 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms