RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 SLC26A4O43511 780 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 DKC1O60832 514 aaKnown RBP eCLIP8.19□□□□□ -1.18e-6■□□□□ 10.8
GARNL3-222ENST00000498801 PARNO95453 639 aaKnown RBP8.19□□□□□ -1.1
GARNL3-222ENST00000498801 TIMP1P01033 207 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 PFKMP08237 780 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 GNAT1P11488 350 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 MUTP22033 750 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 ITGB8P26012 769 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 MARK3P27448 753 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 RFC2P35250 354 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 CLCN7P51798 805 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 GYS2P54840 703 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 GFRA1P56159 465 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 SUMO1P63165 101 aaKnown RBP8.19□□□□□ -1.1
GARNL3-222ENST00000498801 PRKCEQ02156 737 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 CTTNQ14247 550 aaKnown RBP8.19□□□□□ -1.1
GARNL3-222ENST00000498801 SF1Q15637 639 aaKnown RBP8.19□□□□□ -1.1
GARNL3-222ENST00000498801 ZRSR1Q15695 479 aaKnown RBP8.19□□□□□ -1.1
GARNL3-222ENST00000498801 MARCH8Q5T0T0 291 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 RESP18Q5W5W9 173 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 ADALQ6DHV7 355 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 MFSD5Q6N075 450 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 USP49Q70CQ1 688 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 CABP7Q86V35 215 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 ZDHHC13Q8IUH4 622 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 TPH2Q8IWU9 490 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 C7orf31Q8N865 590 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 RASSF8Q8NHQ8 419 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 DPF3Q92784 378 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 CALML4Q96GE6 196 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 TCTN2Q96GX1 697 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 CDK5RAP3Q96JB5 506 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 CCSER1Q9C0I3 900 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 HIPK3Q9H422 1215 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 RNPEPQ9H4A4 650 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 TRMT13Q9NUP7 481 aaKnown RBP8.19□□□□□ -1.1
GARNL3-222ENST00000498801 WRAP73Q9P2S5 460 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-222ENST00000498801 HDAC6Q9UBN7 1215 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 KDM3AQ9Y4C1 1321 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 ALPK3Q96L96 1907 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 C17orf102A2RUQ5 167 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 RRN3P2A6NIE6 340 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 H3BS24 57 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 CYP26A1O43174 497 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 DYRK3O43781 588 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 HBP1O60381 514 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 DLX3O60479 287 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 STBD1O95210 358 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 CMA1P23946 247 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 YWHABP31946 246 aaKnown RBP8.18□□□□□ -1.1
GARNL3-222ENST00000498801 POU4F1Q01851 419 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 PPFIA1Q13136 1202 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 KARSQ15046 597 aaKnown RBP8.18□□□□□ -1.1
GARNL3-222ENST00000498801 PLCB4Q15147 1175 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 TARBP2Q15633 366 aaKnown RBP8.18□□□□□ -1.1
GARNL3-222ENST00000498801 PTGISQ16647 500 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 DPY19L1Q2PZI1 675 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 TMEM119Q4V9L6 283 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 XKR3Q5GH77 459 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 HYIQ5T013 277 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 CWF19L1Q69YN2 538 aaKnown RBP8.18□□□□□ -1.1
GARNL3-222ENST00000498801 TSPYL5Q86VY4 417 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-222ENST00000498801 C4orf19Q8IY42 314 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 PLD6Q8N2A8 252 aaKnown RBP8.18□□□□□ -1.1
GARNL3-222ENST00000498801 LINC01465Q8N7H1 131 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 HSPA12BQ96MM6 686 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 CEP89Q96ST8 783 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 PLIN2Q99541 437 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 MCMBPQ9BTE3 642 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 NT5C3AQ9H0P0 336 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 TRPV6Q9H1D0 765 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 WNT8AQ9H1J5 351 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 DDX19AQ9NUU7 478 aaKnown RBP8.18□□□□□ -1.1
GARNL3-222ENST00000498801 CCDC39Q9UFE4 941 aa8.18□□□□□ -1.1
GARNL3-222ENST00000498801 WDR81Q562E7 1941 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 A0A087X0B3 334 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 IGKV6-21A0A0C4DH24 114 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 FAM237AA0A1B0GTK4 181 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 A0A1B0GVL5 298 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 WASH4PA8MWX3 477 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 GOLGA6L22H0YM25 854 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 C22orf31O95567 290 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 CXCL10P02778 98 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 CD3EP07766 207 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 SNRPB2P08579 225 aaKnown RBP8.17□□□□□ -1.1
GARNL3-222ENST00000498801 PFKFB1P16118 471 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 HOXC12P31275 282 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 STAT6P42226 847 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 MAGEA10P43363 369 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-222ENST00000498801 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 MAP4K2Q12851 820 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 BFSP2Q13515 415 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 CBX2Q14781 532 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-222ENST00000498801 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
GARNL3-222ENST00000498801 ZNF484Q5JVG2 852 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 RNF187Q5TA31 235 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-222ENST00000498801 RRAGBQ5VZM2 374 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 ANO5Q75V66 913 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 OTUD6AQ7L8S5 288 aa8.17□□□□□ -1.1
GARNL3-222ENST00000498801 TRMT1LQ7Z2T5 733 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms