RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 PLVAPQ9BX97 442 aa11.54□□□□□ -0.56
GPATCH4-210ENST00000498756 ZBP1Q9H171 429 aa11.54□□□□□ -0.56
GPATCH4-210ENST00000498756 CRTAC1Q9NQ79 661 aa11.54□□□□□ -0.56
GPATCH4-210ENST00000498756 DDX43Q9NXZ2 648 aaKnown RBP11.54□□□□□ -0.56
GPATCH4-210ENST00000498756 CEP72Q9P209 647 aa11.54□□□□□ -0.56
GPATCH4-210ENST00000498756 FBXL5Q9UKA1 691 aa11.54□□□□□ -0.56
GPATCH4-210ENST00000498756 CAPN11Q9UMQ6 739 aa11.54□□□□□ -0.56
GPATCH4-210ENST00000498756 SF3B1O75533 1304 aaKnown RBP eCLIP11.54□□□□□ -0.56
GPATCH4-210ENST00000498756 PLXNA4Q9HCM2 1894 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 MYBPHLA2RUH7 354 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 HIDE1A8MVS5 230 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 A8MXQ7 604 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 F8VZ95 297 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 FSCN2O14926 492 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 SYN3O14994 580 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 TRAPPC3O43617 180 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 GFPT2O94808 682 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 VNN2O95498 520 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 RB1P06400 928 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 TPM3P06753 285 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 FAM163BP0C2L3 166 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 SKILP12757 684 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 TRIM21P19474 475 aaKnown RBP11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 PPM1AP35813 382 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 USP8P40818 1118 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 ZNF132P52740 706 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 PSMC1P62191 440 aaKnown RBP11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 DSG1Q02413 1049 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 KRT17Q04695 432 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 PTPN14Q15678 1187 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 USP41Q3LFD5 358 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 IRF2BP2Q7Z5L9 587 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 GLYCTKQ8IVS8 523 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 FAM71AQ8IYT1 594 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 C12orf29Q8N999 325 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 TC2NQ8N9U0 490 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 RBBP8NLQ8NC74 664 aaPredicted RBP11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 GDPD5Q8WTR4 605 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 FAXDC2Q96IV6 333 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 SNX25Q9H3E2 840 aa11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 BARX2Q9UMQ3 279 aaPredicted RBP11.53□□□□□ -0.56
GPATCH4-210ENST00000498756 A0A1W2PQJ5 194 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 FAM170AA1A519 330 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 DLL1O00548 723 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 CXCL14O95715 111 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 CTSAP10619 480 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 KRT5P13647 590 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 P4HA1P13674 534 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 CHRNB2P17787 502 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 PTPN1P18031 435 aaKnown RBP11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 PAX3P23760 479 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 TBXAS1P24557 533 aaPredicted RBP11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 KRT9P35527 623 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 SOX5P35711 763 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 GLUD2P49448 558 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 ARID5AQ03989 594 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 YWHAHQ04917 246 aaPredicted RBP11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 CTXN3Q4LDR2 81 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 WDR59Q6PJI9 974 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 PAQR9Q6ZVX9 377 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 CACNA2D4Q7Z3S7 1137 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 TMC7Q7Z402 723 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 SLC47A2Q86VL8 602 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 DRC7Q8IY82 874 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 CRYBG2Q8N1P7 616 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 TMEM86AQ8N2M4 240 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 PIK3R5Q8WYR1 880 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 SAMD11Q96NU1 681 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 NUP58Q9BVL2 599 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 RHOBTB2Q9BYZ6 727 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 EDEM3Q9BZQ6 932 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 PRDM6Q9NQX0 595 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 MTRRQ9UBK8 725 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 GTF3C4Q9UKN8 822 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 RWDD3Q9Y3V2 267 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.52□□□□□ -0.573e-7■■■■□ 20.4
GPATCH4-210ENST00000498756 MTCH2Q9Y6C9 303 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 MYO7AQ13402 2215 aa11.52□□□□□ -0.57
GPATCH4-210ENST00000498756 NLRC5Q86WI3 1866 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 CLDN5O00501 218 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 TEX28O15482 410 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 MFAP3LO75121 409 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 PLEKP08567 350 aaPredicted RBP11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 CNPP09543 421 aaKnown RBP11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 POU3F3P20264 500 aaPredicted RBP11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 BRD2P25440 801 aaKnown RBP11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 OR1D2P34982 312 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 STAT1P42224 750 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 LHX1P48742 406 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 ARPP19P56211 112 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 ZBED6P86452 979 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 PSMD5Q16401 504 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 PLPP4Q5VZY2 271 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 HGSNATQ68CP4 663 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 FAM171BQ6P995 826 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 ENOSF1Q7L5Y1 443 aa11.51□□□□□ -0.57
GPATCH4-210ENST00000498756 ADGRD2Q7Z7M1 963 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms