RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	MAPRE1	Q15691	268 aa	Known RBP	11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	SLC39A12	Q504Y0	691 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	BMP8A	Q7Z5Y6	402 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	ADGRF2	Q8IZF7	708 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	TAF4B	Q92750	862 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	FGF13	Q92913	245 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	MYADM	Q96S97	322 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	MMS19	Q96T76	1030 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	TSG101	Q99816	390 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	CORO1B	Q9BR76	489 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	LRFN3	Q9BTN0	628 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	MKNK1	Q9BUB5	465 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	GPR88	Q9GZN0	384 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	VRTN	Q9H8Y1	702 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	ASAH2	Q9NR71	780 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	DDX43	Q9NXZ2	648 aa	Known RBP	11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	L1RE1	Q9UN81	338 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	YIPF1	Q9Y548	306 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	PCDHA5	Q9Y5H7	936 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	TSC2	P49815	1807 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	MYO10	Q9HD67	2058 aa		11.28	□□□□□ -0.6
FXR1-222	ENST00000498658	TMEM221	A6NGB7	291 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	ANHX	E9PGG2	379 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658		M0R296	226 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	GABRD	O14764	452 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	PSMA7	O14818	248 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	CETN3	O15182	167 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	TACC1	O75410	805 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	CST3	P01034	146 aa	Predicted RBP	11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	P4HA1	P13674	534 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	VAMP7	P51809	220 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	EPHA5	P54756	1037 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	NTHL1	P78549	312 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	LRRC63	Q05C16	580 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	SOWAHA	Q2M3V2	549 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	SGSM1	Q2NKQ1	1148 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	WDR72	Q3MJ13	1102 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	MGAT5B	Q3V5L5	792 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	LIMS2	Q7Z4I7	341 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	FAM186B	Q8IYM0	893 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	ATAD1	Q8NBU5	361 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	FEZF2	Q8TBJ5	459 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	RTP3	Q9BQQ7	232 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	ABCB6	Q9NP58	842 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	HCFC1R1	Q9NWW0	138 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	CDH9	Q9ULB4	789 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	PCDHB5	Q9Y5E4	795 aa		11.27	□□□□□ -0.61
FXR1-222	ENST00000498658	STX10	O60499	249 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	N4BP1	O75113	896 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	AKAP3	O75969	853 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	C4BPA	P04003	597 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	ASGR2	P07307	311 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	EPB41	P11171	864 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	TRIM21	P19474	475 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	WARS	P23381	471 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	GTF2H1	P32780	548 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	PRCP	P42785	496 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	CASP4	P49662	377 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	RPL10A	P62906	217 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	FKBP3	Q00688	224 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	NCOA4	Q13772	614 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	TAF12	Q16514	161 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	ZACN	Q401N2	412 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	ZCWPW2	Q504Y3	356 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	INTS6L	Q5JSJ4	861 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	TDRD10	Q5VZ19	366 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	C4orf50	Q6ZRC1	276 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	SUGP1	Q8IWZ8	645 aa	Known RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	NPAS3	Q8IXF0	933 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	SLC44A3	Q8N4M1	653 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	CCDC150	Q8NCX0	1101 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	ITFG1	Q8TB96	612 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	FAM200A	Q8TCP9	573 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	ZNF516	Q92618	1163 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	PSMG2	Q969U7	264 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	TMEM209	Q96SK2	561 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	SEPT5	Q99719	369 aa	Predicted RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	IMPG2	Q9BZV3	1241 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	DNAI2	Q9GZS0	605 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	SNX25	Q9H3E2	840 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	C11orf16	Q9NQ32	467 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	ABI2	Q9NYB9	513 aa	Predicted RBP	11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	CEP72	Q9P209	647 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	ZMYM5	Q9UJ78	669 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	DUSP12	Q9UNI6	340 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	SLC27A5	Q9Y2P5	690 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	DOCK8	Q8NF50	2099 aa		11.26	□□□□□ -0.61
FXR1-222	ENST00000498658	FAM86C2P	A6NEL3	165 aa		11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	SLC16A3	O15427	465 aa	Known RBP	11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	GADD45B	O75293	160 aa	Predicted RBP	11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	CLSTN1	O94985	981 aa		11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	VNN2	O95498	520 aa		11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	HAPLN1	P10915	354 aa	Predicted RBP	11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	SRF	P11831	508 aa		11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	GNL1	P36915	607 aa	Predicted RBP	11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	MYL6	P60660	151 aa		11.25	□□□□□ -0.61
FXR1-222	ENST00000498658	HTR4	Q13639	388 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms